RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 AOPEPQ8N6M6 819 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 OR14C36Q8NHC7 312 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 ERGIC2Q96RQ1 377 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 HAPLN3Q96S86 360 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 PCDHB18PQ96TA0 734 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 C2orf49Q9BVC5 232 aaPredicted RBP23.6■■□□□ 1.37
COL9A3-213ENST00000489045 EBF2Q9HAK2 575 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 VPS51Q9UID3 782 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 PCDHB9Q9Y5E1 797 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 CABIN1Q9Y6J0 2220 aa23.6■■□□□ 1.37
COL9A3-213ENST00000489045 PLK4O00444 970 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 SRGAP2O75044 1071 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 ENDOD1O94919 500 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 GJB6O95452 261 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 SRCP12931 536 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 TYRO3Q06418 890 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 TRIP6Q15654 476 aaKnown RBP23.59■■□□□ 1.37
COL9A3-213ENST00000489045 CDO1Q16878 200 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 RAB6CQ53S08 254 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 C6orf118Q5T5N4 469 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP23.59■■□□□ 1.37
COL9A3-213ENST00000489045 APTXQ7Z2E3 356 aaKnown RBP23.59■■□□□ 1.37
COL9A3-213ENST00000489045 RXFP2Q8WXD0 754 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 SLC6A18Q96N87 628 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 RAB6CQ9H0N0 254 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 SARDHQ9UL12 918 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 HS3ST2Q9Y278 367 aa23.59■■□□□ 1.37
COL9A3-213ENST00000489045 A0A0D9SEW6 157 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 LRRC10BA6NIK2 292 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 C10orf142B7Z368 130 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 ALOX15BO15296 676 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 HYAL3O43820 417 aaPredicted RBP23.58■■□□□ 1.37
COL9A3-213ENST00000489045 BNIP3LO60238 219 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 MT-CO1P00395 513 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 UNGP13051 313 aaPredicted RBP23.58■■□□□ 1.37
COL9A3-213ENST00000489045 OR1E1P30953 314 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 NSFP46459 744 aaKnown RBP23.58■■□□□ 1.37
COL9A3-213ENST00000489045 CCR5P51681 352 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 RACK1P63244 317 aaKnown RBP23.58■■□□□ 1.37
COL9A3-213ENST00000489045 PTP4A2Q12974 167 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 C15orf59Q2T9L4 293 aaPredicted RBP23.58■■□□□ 1.37
COL9A3-213ENST00000489045 CCDC14Q49A88 953 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 KCNT1Q5JUK3 1230 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 DCAF4L2Q8NA75 395 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 ATP11CQ8NB49 1132 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 JOSD2Q8TAC2 188 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 SETD7Q8WTS6 366 aaKnown RBP23.58■■□□□ 1.37
COL9A3-213ENST00000489045 TMEM63CQ9P1W3 806 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 PCOLCE2Q9UKZ9 415 aa23.58■■□□□ 1.37
COL9A3-213ENST00000489045 DOCK9Q9BZ29 2069 aa23.58■■□□□ 1.36
COL9A3-213ENST00000489045 CHD5Q8TDI0 1954 aa23.58■■□□□ 1.36
COL9A3-213ENST00000489045 C1QTNF3-AMACRE9PGA6 284 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 MCF2LO15068 1137 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 ATP1A3P13637 1013 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 SDC4P31431 198 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 PPP2CBP62714 309 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 PPP2CAP67775 309 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 CLEC16AQ2KHT3 1053 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 POM121L1PQ3SYA9 428 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 FAM46CQ5VWP2 391 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 OR7D4Q8NG98 312 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 PIP4K2CQ8TBX8 421 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 FAM131CQ96AQ9 280 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 ZYG11BQ9C0D3 744 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 ZNF212Q9UDV6 495 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 PPM1HQ9ULR3 514 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 IGF2RP11717 2491 aa23.57■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3DA0A087WVF3 549 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3IA0A087WXS9 549 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3EA0A087X179 549 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3KA0A087X1G2 549 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3FA6NER0 549 aaPredicted RBP23.56■■□□□ 1.36
COL9A3-213ENST00000489045 C2CD4BA6NLJ0 364 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 C1QTNF9BB2RNN3 333 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3LB9A6J9 549 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 K7ERQ8 282 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 KCNK3O14649 394 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 CBFA2T3O75081 653 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 RTN2O75298 545 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3HP0C7X1 549 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 C1QTNF9P0C862 333 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 GLDCP23378 1020 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 RRM1P23921 792 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 CTSKP43235 329 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 C21orf59P57076 290 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 ZNF423Q2M1K9 1284 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 ANO6Q4KMQ2 910 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3GQ6DHY5 549 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3CQ6IPX1 549 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 LINGO4Q6UY18 593 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 TBC1D3Q8IZP1 549 aaPredicted RBP23.56■■□□□ 1.36
COL9A3-213ENST00000489045 ACE2Q9BYF1 805 aaPredicted RBP23.56■■□□□ 1.36
COL9A3-213ENST00000489045 SEPT11Q9NVA2 429 aaKnown RBP23.56■■□□□ 1.36
COL9A3-213ENST00000489045 ADAM22Q9P0K1 906 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 PCDHGB2Q9Y5G2 931 aa23.56■■□□□ 1.36
COL9A3-213ENST00000489045 ILVBLA1L0T0 632 aa23.55■■□□□ 1.36
COL9A3-213ENST00000489045 H0Y8X5 98 aa23.55■■□□□ 1.36
COL9A3-213ENST00000489045 VILLO15195 856 aa23.55■■□□□ 1.36
COL9A3-213ENST00000489045 FLRT2O43155 660 aa23.55■■□□□ 1.36
COL9A3-213ENST00000489045 SLC7A4O43246 635 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms