RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, human

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC6-231	ENST00000488905	TRIM69	Q86WT6	500 aa		18.93	■□□□□ 0.62
HDAC6-231	ENST00000488905	EID2	Q8N6I1	236 aa		18.93	■□□□□ 0.62
HDAC6-231	ENST00000488905	MFSD2A	Q8NA29	543 aa		18.93	■□□□□ 0.62
HDAC6-231	ENST00000488905	HNRNPLL	Q8WVV9	542 aa	Known RBP	18.93	■□□□□ 0.62
HDAC6-231	ENST00000488905	AJAP1	Q9UKB5	411 aa	Predicted RBP	18.93	■□□□□ 0.62
HDAC6-231	ENST00000488905	PPM1H	Q9ULR3	514 aa		18.93	■□□□□ 0.62
HDAC6-231	ENST00000488905	DMTF1	Q9Y222	760 aa		18.93	■□□□□ 0.62
HDAC6-231	ENST00000488905	OR51B4	Q9Y5P0	310 aa		18.93	■□□□□ 0.62
HDAC6-231	ENST00000488905	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	PAGE1	O75459	146 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	CLDN11	O75508	207 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	PON1	P27169	355 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	NOS2	P35228	1153 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	RXRG	P48443	463 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	PTK2	Q05397	1052 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	ZNF177	Q13360	481 aa	Predicted RBP	18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	ACAP1	Q15027	740 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	DLG2	Q15700	870 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	POM121L1P	Q3SYA9	428 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	SMYD5	Q6GMV2	418 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	IQCH	Q86VS3	1027 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	SPATS2	Q86XZ4	545 aa	Known RBP	18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	SH2D3C	Q8N5H7	860 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	ZNF397	Q8NF99	534 aa	Predicted RBP	18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	PIP4K2C	Q8TBX8	421 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	SYNC	Q9H7C4	482 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	KIAA1468	Q9P260	1216 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	TBC1D30	Q9Y2I9	924 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905	ASXL3	Q9C0F0	2248 aa		18.92	■□□□□ 0.62
HDAC6-231	ENST00000488905		M0QYT0	321 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	MCF2L	O15068	1137 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	C1S	P09871	688 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	CDK4	P11802	303 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	CDH4	P55283	916 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	CLDN6	P56747	220 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	SNX16	P57768	344 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	SLC6A3	Q01959	620 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	C5orf22	Q49AR2	442 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	SETMAR	Q53H47	684 aa	Predicted RBP	18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	C14orf80	Q86SX3	495 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	IRF2BP1	Q8IU81	584 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	NXPE2	Q96DL1	559 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	MUC3B	Q9H195	1237 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	PREB	Q9HCU5	417 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	SIX2	Q9NPC8	291 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	PIGV	Q9NUD9	493 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	HS3ST2	Q9Y278	367 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	GTF3C3	Q9Y5Q9	886 aa		18.91	■□□□□ 0.62
HDAC6-231	ENST00000488905	CHD5	Q8TDI0	1954 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	BNIP3L	O60238	219 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	MAGEC1	O60732	1142 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	PNMA6A	P0CW24	399 aa	Predicted RBP	18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	SRC	P12931	536 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	ZNF18	P17022	549 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	KRT9	P35527	623 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	MTIF2	P46199	727 aa	Known RBP	18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	OVGP1	Q12889	678 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	BNIP3	Q12983	259 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	KANSL1	Q7Z3B3	1105 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	SLC47A2	Q86VL8	602 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	ZDHHC17	Q8IUH5	632 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	TSC1	Q92574	1164 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	LRIG1	Q96JA1	1093 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	SIK2	Q9H0K1	926 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	RRN3	Q9NYV6	651 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	PTPRQ	Q9UMZ3	2332 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905	SHROOM3	Q8TF72	1996 aa		18.9	■□□□□ 0.62
HDAC6-231	ENST00000488905		A0A087WV48	116 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	CNTN5	O94779	1100 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	RHOC	P08134	193 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	JUP	P14923	745 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	CLCN1	P35523	988 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	KRT83	P78385	493 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	STAT4	Q14765	748 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	CAMK4	Q16566	473 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	SOWAHC	Q53LP3	525 aa	Predicted RBP	18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	BRMS1L	Q5PSV4	323 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	C6orf118	Q5T5N4	469 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	PIP5KL1	Q5T9C9	394 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	HES3	Q5TGS1	186 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	CCDC114	Q96M63	670 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	PSMB7	Q99436	277 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	NPY6R	Q99463	290 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	C2orf49	Q9BVC5	232 aa	Predicted RBP	18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	TKTL2	Q9H0I9	626 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	PLCB1	Q9NQ66	1216 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	ANLN	Q9NQW6	1124 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	ARHGEF38	Q9NXL2	777 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	VPS51	Q9UID3	782 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	DNAJC12	Q9UKB3	198 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	STAP1	Q9ULZ2	295 aa		18.89	■□□□□ 0.61
HDAC6-231	ENST00000488905	PRAMEF26	H0Y7S4	382 aa		18.88	■□□□□ 0.61
HDAC6-231	ENST00000488905		I6L893	689 aa	Predicted RBP	18.88	■□□□□ 0.61
HDAC6-231	ENST00000488905	SNAP91	O60641	907 aa		18.88	■□□□□ 0.61
HDAC6-231	ENST00000488905	ADCY5	O95622	1261 aa		18.88	■□□□□ 0.61
HDAC6-231	ENST00000488905	MT-CO1	P00395	513 aa		18.88	■□□□□ 0.61
HDAC6-231	ENST00000488905	CTSL	P07711	333 aa		18.88	■□□□□ 0.61
HDAC6-231	ENST00000488905	TFE3	P19532	575 aa	Predicted RBP	18.88	■□□□□ 0.61
HDAC6-231	ENST00000488905	CXCR3	P49682	368 aa		18.88	■□□□□ 0.61
HDAC6-231	ENST00000488905	SULT1E1	P49888	294 aa		18.88	■□□□□ 0.61

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