RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ARL14EPQ8N8R7 260 aaPredicted RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 OXNAD1Q96HP4 312 aaPredicted RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 CYP2S1Q96SQ9 504 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 TRPC7Q9HCX4 862 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 BCCIPQ9P287 314 aaKnown RBP eCLIP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 ZFP37Q9Y6Q3 630 aaPredicted RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 TRANK1O15050 2925 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 TCRBV9S1A1TA0A576 114 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 GFRA2O00451 464 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 RAMP2O60895 175 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 HLA-DQB2P05538 268 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 CA3P07451 260 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 GSTA2P09210 222 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 IRF1P10914 325 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 CDC25CP30307 473 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 OR1E1P30953 314 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 MMP13P45452 471 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SGSHP51688 502 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 EPHA5P54756 1037 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 CDH4P55283 916 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SLC7A9P82251 487 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SMAD3P84022 425 aaKnown RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 HNRNPDQ14103 355 aaKnown RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 ANO4Q32M45 955 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 PPM1LQ5SGD2 360 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 CHST9Q7L1S5 443 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 FAM217AQ8IXS0 508 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 CFAP52Q8N1V2 620 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 ELMOD1Q8N336 334 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 MPP5Q8N3R9 675 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 FBF1Q8TES7 1133 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 USP33Q8TEY7 942 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SLC22A17Q8WUG5 538 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 MRPS31Q92665 395 aaKnown RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 XPO6Q96QU8 1125 aaKnown RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 FCRL5Q96RD9 977 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 EBNA1BP2Q99848 306 aaKnown RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 DHRS4Q9BTZ2 278 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 STMN4Q9H169 189 aaPredicted RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SMPD4Q9NXE4 827 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 ZC3H7BQ9UGR2 993 aaKnown RBP9.64□□□□□ -0.87
SF3B1-211ENST00000487698 SLC24A2Q9UI40 661 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 TTLL3Q9Y4R7 772 aa9.64□□□□□ -0.87
SF3B1-211ENST00000487698 PDE4DIPQ5VU43 2346 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 J3KR12 359 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 CCL16O15467 120 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 CLDN11O75508 207 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 CSPG5O95196 566 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 CPP00450 1065 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 PFKLP17858 780 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 HDCP19113 662 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 HOXA9P31269 272 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 RPS24P62847 133 aaKnown RBP9.63□□□□□ -0.87
SF3B1-211ENST00000487698 POLD3Q15054 466 aaPredicted RBP9.63□□□□□ -0.87
SF3B1-211ENST00000487698 KLHL38Q2WGJ6 581 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 STEAP4Q687X5 459 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 UNC5AQ6ZN44 842 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 OTOP3Q7RTS5 596 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 CYP4X1Q8N118 509 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 TEX26Q8N6G2 289 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 ARNTL2Q8WYA1 636 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 SAMD11Q96NU1 681 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 DDX50Q9BQ39 737 aaKnown RBP9.63□□□□□ -0.87
SF3B1-211ENST00000487698 LRRC40Q9H9A6 602 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 PDFQ9HBH1 243 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 GLOD4Q9HC38 313 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 CASS4Q9NQ75 786 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 MAN1C1Q9NR34 630 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 ASAH2Q9NR71 780 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 PSD3Q9NYI0 1048 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 CPQQ9Y646 472 aa9.63□□□□□ -0.87
SF3B1-211ENST00000487698 RANBP2P49792 3224 aaKnown RBP9.63□□□□□ -0.87
SF3B1-211ENST00000487698 A0A1B0GVM2 712 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 A0A1W2PRU2 124 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 TCAF2A6NFQ2 919 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PRAMEF11O60813 436 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 SHOX2O60902 331 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 CLASP2O75122 1294 aaKnown RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 HOXD9P28356 352 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 HPDP32754 393 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 ACVRL1P37023 503 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 CCR2P41597 374 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 MAGEA10P43363 369 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 GEMIN4P57678 1058 aaKnown RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 ERVK-21P61565 698 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PPP2R2AP63151 447 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 IL10RBQ08334 325 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 OLIG2Q13516 323 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 SPARCL1Q14515 664 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 EFTUD2Q15029 972 aaKnown RBP eCLIP9.62□□□□□ -0.872e-6■■□□□ 13.7
SF3B1-211ENST00000487698 SHHQ15465 462 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 STXBP5Q5T5C0 1151 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 TTC39BQ5VTQ0 682 aaPredicted RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 OR52K2Q8NGK3 314 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 ARHGEF2Q92974 986 aaKnown RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 STAMBPL1Q96FJ0 436 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 CFAP36Q96G28 342 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 PPP1R2P1Q96PQ5 205 aa9.62□□□□□ -0.87
SF3B1-211ENST00000487698 TGS1Q96RS0 853 aaKnown RBP9.62□□□□□ -0.87
SF3B1-211ENST00000487698 CORO1BQ9BR76 489 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms