RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 MAFKO60675 156 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 RAMP2O60895 175 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 CDH16O75309 829 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 CLDN11O75508 207 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ANXA9O76027 345 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 IRF1P10914 325 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 PTPN2P17706 415 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 HDCP19113 662 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 NFKB1P19838 968 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 NR1D1P20393 614 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 CORO1AP31146 461 aaKnown RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 STX2P32856 288 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ELK3P41970 407 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 MMP13P45452 471 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 RENBPP51606 427 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 GEMP55040 296 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ERVFC1P60507 584 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 SMAD3P84022 425 aaKnown RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 GAD2Q05329 585 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 NR1H3Q13133 447 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 FASTKD3Q14CZ7 662 aaKnown RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 POLD3Q15054 466 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 LONRF1Q17RB8 773 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 SKIDA1Q1XH10 827 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 MSS51Q4VC12 460 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 HP1BP3Q5SSJ5 553 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ADGRF1Q5T601 910 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 NADSYN1Q6IA69 706 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 LRRC8BQ6P9F7 803 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 C3orf62Q6ZUJ4 267 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 CHST9Q7L1S5 443 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 TFAP2DQ7Z6R9 452 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 LINC00523Q86TU6 105 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 CCNJLQ8IV13 435 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 DENND1CQ8IV53 801 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 LEMD2Q8NC56 503 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 EPS8L3Q8TE67 593 aaKnown RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 IGSF8Q969P0 613 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 TLCD1Q96CP7 247 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 AGAP3Q96P47 875 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 TGS1Q96RS0 853 aaKnown RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 IL12RB2Q99665 862 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 C17orf80Q9BSJ5 609 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 NAT9Q9BTE0 207 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 CEP41Q9BYV8 373 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 MAGEH1Q9H213 219 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ATXN3LQ9H3M9 355 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 LRRC40Q9H9A6 602 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 SP110Q9HB58 689 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 IL21Q9HBE4 155 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 LRRC4CQ9HCJ2 640 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF334Q9HCZ1 680 aaPredicted RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ASAH2Q9NR71 780 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 FETUBQ9UGM5 382 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 IPO11Q9UI26 975 aaKnown RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 SLC24A2Q9UI40 661 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 METRNQ9UJH8 293 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 NOVA2Q9UNW9 492 aaKnown RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 CHMP2BQ9UQN3 213 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF510Q9Y2H8 683 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 AAR2Q9Y312 384 aaKnown RBP7.2□□□□□ -1.26
SF3A3-206ENST00000487062 TEX264Q9Y6I9 313 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 CHD5Q8TDI0 1954 aa7.2□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-206ENST00000487062 GOLGA6L7A0A1B0GV03 622 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 A0A1B0GVM2 712 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 TCAF2A6NFQ2 919 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 SDR42E2A6NKP2 422 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 SOBPA7XYQ1 873 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 POC1B-GALNT4F8VUJ3 575 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 TRDMT1O14717 391 aaKnown RBP7.19□□□□□ -1.26
SF3A3-206ENST00000487062 XYLBO75191 536 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 BANF1O75531 89 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 CNTN5O94779 1100 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 SUN1O94901 812 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 AP2A1O95782 977 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 OLFM2O95897 454 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 CKMP06732 381 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 HNRNPA1P09651 372 aaKnown RBP eCLIP7.19□□□□□ -1.26
SF3A3-206ENST00000487062 MYL4P12829 197 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 HOXB3P14651 431 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-206ENST00000487062 DDX6P26196 483 aaKnown RBP eCLIP7.19□□□□□ -1.26
SF3A3-206ENST00000487062 SSTR1P30872 391 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 OR1E1P30953 314 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 HOXA9P31269 272 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 SLC6A4P31645 630 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 ETFBP38117 255 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 MAGEA3P43357 314 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 SLCO1A2P46721 670 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 IFNAR2P48551 515 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 NPY2RP49146 381 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 CLCN4P51793 760 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 MAGOHP61326 146 aaKnown RBP7.19□□□□□ -1.26
SF3A3-206ENST00000487062 PPP2R2AP63151 447 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 SLC7A9P82251 487 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 SKOR1P84550 965 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 IL10RBQ08334 325 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 ZBTB17Q13105 803 aa7.19□□□□□ -1.26
SF3A3-206ENST00000487062 ZNF177Q13360 481 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-206ENST00000487062 GPM6BQ13491 265 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms