RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 TSPAN9O75954 239 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 FGF18O76093 207 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 POP4O95707 220 aaKnown RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 ESRRBO95718 433 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 SLC4A1P02730 911 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 CLTAP09496 248 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 TOP1P11387 765 aaKnown RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 NPR1P16066 1061 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 EIF2S2P20042 333 aaKnown RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 CHRM3P20309 590 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 TRIM23P36406 574 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 AARSP49588 968 aaKnown RBP eCLIP5.68□□□□□ -1.5
COPS3-209ENST00000486810 PDE6CP51160 858 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 USP14P54578 494 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 C21orf58P58505 322 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 POLR2GP62487 172 aaKnown RBP eCLIP5.68□□□□□ -1.5
COPS3-209ENST00000486810 TAP2Q03519 686 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 FPGSQ05932 587 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 GALNT1Q10472 559 aaPredicted RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 ITGB3BPQ13352 177 aaPredicted RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 XRCC4Q13426 336 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 FGL2Q14314 439 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 PSMD6Q15008 389 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 OASLQ15646 514 aaKnown RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 KHDC1LQ5JSQ8 128 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 CYB5D1Q6P9G0 228 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 ZNF704Q6ZNC4 412 aaPredicted RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 Q6ZNX1 250 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 PSD4Q8NDX1 1056 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 OR7G1Q8NGA0 311 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 AZIN2Q96A70 460 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 FAM149B1Q96BN6 582 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 C11orf24Q96F05 449 aaPredicted RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 ANKRD36BP1Q96IX9 119 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 CNPPD1Q9BV87 410 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 STMN4Q9H169 189 aaPredicted RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 ZMAT3Q9HA38 289 aaKnown RBP5.68□□□□□ -1.5
COPS3-209ENST00000486810 UBN1Q9NPG3 1134 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 C8orf4Q9NR00 106 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 INTS13Q9NVM9 706 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 LUZP4Q9P127 313 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 PDP2Q9P2J9 529 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 ANAPC5Q9UJX4 755 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 VANGL2Q9ULK5 521 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 L1RE1Q9UN81 338 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 ZBTB1Q9Y2K1 713 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 NEU2Q9Y3R4 380 aa5.68□□□□□ -1.5
COPS3-209ENST00000486810 RTL1A6NKG5 1358 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 LRPPRCP42704 1394 aaKnown RBP5.67□□□□□ -1.5
COPS3-209ENST00000486810 DPPA5A6NC42 116 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 M0QYG6 137 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 DCLK1O15075 740 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 PROM1O43490 865 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 DDHD2O94830 711 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 INMTO95050 263 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 SERPINC1P01008 464 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 DLATP10515 647 aaKnown RBP5.67□□□□□ -1.5
COPS3-209ENST00000486810 HNF1BP35680 557 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 CD86P42081 329 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 STT3AP46977 705 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 AP3M2P53677 418 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 BLOC1S1P78537 153 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 SQLEQ14534 574 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 PUM3Q15397 648 aaKnown RBP5.67□□□□□ -1.5
COPS3-209ENST00000486810 GPR162Q16538 588 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 MINDY4Q4G0A6 757 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 CDONQ4KMG0 1287 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 ZNF658Q5TYW1 1059 aaPredicted RBP5.67□□□□□ -1.5
COPS3-209ENST00000486810 KIAA0895LQ68EN5 471 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 OR7E24Q6IFN5 339 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 KLC3Q6P597 504 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 VWA1Q6PCB0 445 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 HACE1Q8IYU2 909 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 KIAA0319LQ8IZA0 1049 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 KIRREL3Q8IZU9 778 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 BBOF1Q8ND07 529 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 FAM46DQ8NEK8 389 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 SUPT20HQ8NEM7 779 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 ANGPTL6Q8NI99 470 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 OSCP1Q8WVF1 389 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 CAVIN3Q969G5 261 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 NSMCE3Q96MG7 304 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 RPRD1AQ96P16 312 aaPredicted RBP5.67□□□□□ -1.5
COPS3-209ENST00000486810 HAPLN3Q96S86 360 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 P2RX7Q99572 595 aaKnown RBP5.67□□□□□ -1.5
COPS3-209ENST00000486810 TSG101Q99816 390 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 GAL3ST1Q99999 423 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 GPATCH1Q9BRR8 931 aaKnown RBP5.67□□□□□ -1.5
COPS3-209ENST00000486810 NUP58Q9BVL2 599 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 INTS2Q9H0H0 1204 aaKnown RBP5.67□□□□□ -1.5
COPS3-209ENST00000486810 PRDM13Q9H4Q3 707 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 UCK1Q9HA47 277 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 SDHAF3Q9NRP4 125 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 ATP8A2Q9NTI2 1148 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 EURLQ9NYK6 297 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 EHD2Q9NZN4 543 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 SEC63Q9UGP8 760 aaKnown RBP5.67□□□□□ -1.5
COPS3-209ENST00000486810 CPA4Q9UI42 421 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 TMEM5Q9Y2B1 443 aa5.67□□□□□ -1.5
COPS3-209ENST00000486810 TTC41PQ6P2S7 1318 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms