RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 ANLNQ9NQW6 1124 aa20.89■□□□□ 0.93
CHRD-215ENST00000485883 PCDHGC3Q9UN70 934 aa20.89■□□□□ 0.93
CHRD-215ENST00000485883 SNX10Q9Y5X0 201 aa20.89■□□□□ 0.93
CHRD-215ENST00000485883 COL5A1P20908 1838 aaPredicted RBP20.89■□□□□ 0.93
CHRD-215ENST00000485883 DOCK9Q9BZ29 2069 aa20.89■□□□□ 0.93
CHRD-215ENST00000485883 ASXL3Q9C0F0 2248 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.88■□□□□ 0.93
CHRD-215ENST00000485883 GTPBP10A4D1E9 387 aaKnown RBP20.88■□□□□ 0.93
CHRD-215ENST00000485883 BNIP3LO60238 219 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 PAGE1O75459 146 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 CNTN5O94779 1100 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 MT-CO1P00395 513 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 PNMA6AP0CW24 399 aaPredicted RBP20.88■□□□□ 0.93
CHRD-215ENST00000485883 JUPP14923 745 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 TFE3P19532 575 aaPredicted RBP20.88■□□□□ 0.93
CHRD-215ENST00000485883 PON1P27169 355 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 RXRGP48443 463 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 ARRB1P49407 418 aaPredicted RBP20.88■□□□□ 0.93
CHRD-215ENST00000485883 VASPP50552 380 aaPredicted RBP20.88■□□□□ 0.93
CHRD-215ENST00000485883 ZNF177Q13360 481 aaPredicted RBP20.88■□□□□ 0.93
CHRD-215ENST00000485883 MAN2A1Q16706 1144 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 PTPN20Q4JDL3 420 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 SLC45A4Q5BKX6 768 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 SFMBT2Q5VUG0 894 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 KANSL1Q7Z3B3 1105 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 PIP4K2CQ8TBX8 421 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 GPT2Q8TD30 523 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 TSC1Q92574 1164 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 BBC3Q96PG8 261 aaPredicted RBP20.88■□□□□ 0.93
CHRD-215ENST00000485883 ERVMER34-1Q9H9K5 563 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 SIX2Q9NPC8 291 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 PLCB1Q9NQ66 1216 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 SLC25A13Q9UJS0 675 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 VPS28Q9UK41 221 aa20.88■□□□□ 0.93
CHRD-215ENST00000485883 I6L893 689 aaPredicted RBP20.87■□□□□ 0.93
CHRD-215ENST00000485883 M0QYT0 321 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 RNF103O00237 685 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 MCF2LO15068 1137 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 YKT6O15498 198 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 SLC7A4O43246 635 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 OXCT1P55809 520 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 TAS2R38P59533 333 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 EXOC3L4Q17RC7 722 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 FAM46CQ5VWP2 391 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 DSG4Q86SJ6 1040 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 SH2D3CQ8N5H7 860 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 SIK2Q9H0K1 926 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 KDM4CQ9H3R0 1056 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 CAAP1Q9H8G2 361 aa20.87■□□□□ 0.93
CHRD-215ENST00000485883 TPX2Q9ULW0 747 aaKnown RBP20.87■□□□□ 0.93
CHRD-215ENST00000485883 ARID1BQ8NFD5 2236 aaPredicted RBP20.87■□□□□ 0.93
CHRD-215ENST00000485883 A0A087WV48 116 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 FAM170AA1A519 330 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 SNAP91O60641 907 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 SDC3O75056 442 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 DAB1O75553 588 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 ADCY5O95622 1261 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 CTSLP07711 333 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 ZNF18P17022 549 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 CLCN1P35523 988 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 SLC6A3Q01959 620 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 TARDBPQ13148 414 aaKnown RBP eCLIP20.86■□□□□ 0.93
CHRD-215ENST00000485883 C5orf22Q49AR2 442 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 ALFQ53S48 1182 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 HES3Q5TGS1 186 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 SLC47A2Q86VL8 602 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 TRIM69Q86WT6 500 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 KLK6Q92876 244 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 DCBLD2Q96PD2 775 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 PSMB7Q99436 277 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 PIGVQ9NUD9 493 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 TBC1D30Q9Y2I9 924 aa20.86■□□□□ 0.93
CHRD-215ENST00000485883 C1QTNF3-AMACRE9PGA6 284 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 K7ERQ8 282 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 FOXN3O00409 490 aaPredicted RBP20.85■□□□□ 0.93
CHRD-215ENST00000485883 CLDN11O75508 207 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 MBD3O95983 291 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 C1SP09871 688 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 SRCP12931 536 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 PRKCSHP14314 528 aaPredicted RBP20.85■□□□□ 0.93
CHRD-215ENST00000485883 NOS2P35228 1153 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 PTK2Q05397 1052 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 STAT4Q14765 748 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 FBXL19Q6PCT2 694 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 SLC26A9Q7LBE3 791 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 ZNF683Q8IZ20 524 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 OXR1Q8N573 874 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 PPP1R9BQ96SB3 815 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 MYOCQ99972 504 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 MUC3BQ9H195 1237 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 TMPRSS4Q9NRS4 437 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 DNAJC12Q9UKB3 198 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 DMTF1Q9Y222 760 aa20.85■□□□□ 0.93
CHRD-215ENST00000485883 E9PAM4 449 aa20.84■□□□□ 0.93
CHRD-215ENST00000485883 PRLRP16471 622 aa20.84■□□□□ 0.93
CHRD-215ENST00000485883 KRT9P35527 623 aa20.84■□□□□ 0.93
CHRD-215ENST00000485883 CDH4P55283 916 aa20.84■□□□□ 0.93
CHRD-215ENST00000485883 RNASE9P60153 205 aaKnown RBP20.84■□□□□ 0.93
CHRD-215ENST00000485883 PIP5KL1Q5T9C9 394 aa20.84■□□□□ 0.93
CHRD-215ENST00000485883 RBM43Q6ZSC3 357 aaKnown RBP20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms