RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 GK5Q6ZS86 529 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 XYLT1Q86Y38 959 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 PCYOX1LQ8NBM8 494 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 ACER1Q8TDN7 264 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 PPWD1Q96BP3 646 aaKnown RBP12.02□□□□□ -0.48
VTI1A-205ENST00000483122 ATXN7L3BQ96GX2 97 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 CEP170P1Q96L14 293 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 DHRS1Q96LJ7 313 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 APBA2Q99767 749 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 MUC3BQ9H195 1237 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 VPS33BQ9H267 617 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 CCDC68Q9H2F9 335 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 ZBTB26Q9HCK0 441 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 PALMDQ9NP74 551 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 SNX15Q9NRS6 342 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 ATAD3AQ9NVI7 634 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 RIC8BQ9NVN3 520 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 GPRC5DQ9NZD1 345 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 PCDHGC3Q9UN70 934 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 HES2Q9Y543 173 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 PCDHGA7Q9Y5G6 932 aa12.02□□□□□ -0.48
VTI1A-205ENST00000483122 NRP1O14786 923 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 GRID2O43424 1007 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 KDM1AO60341 852 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 SNAP91O60641 907 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 ALDH1A2O94788 518 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 ATG7O95352 703 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 JAK1P23458 1154 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 TFDP2Q14188 446 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 CLPPQ16740 277 aaPredicted RBP12.02□□□□□ -0.49
VTI1A-205ENST00000483122 FAM47CQ5HY64 1035 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 STEAP4Q687X5 459 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 LDHDQ86WU2 507 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 SIX6OS1Q8N1H7 587 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 PDZD7Q9H5P4 517 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 PTBP2Q9UKA9 531 aaKnown RBP12.02□□□□□ -0.49
VTI1A-205ENST00000483122 NOX1Q9Y5S8 564 aa12.02□□□□□ -0.49
VTI1A-205ENST00000483122 BCLAF3A2AJT9 711 aaKnown RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 CCDC162PA2VCL2 907 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 TRIM64A6NGJ6 449 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 ZNF839A8K0R7 811 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 KCNU1A8MYU2 1149 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 TMEM114B3SHH9 223 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 TADA2AO75478 443 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 LDHAP00338 332 aaKnown RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 CYP2C9P11712 490 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 S100A1P23297 94 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 MYF6P23409 242 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 IL4RP24394 825 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 SLC7A1P30825 629 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 POLR2BP30876 1174 aaKnown RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 CRKP46108 304 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 MYL6P60660 151 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 TNK2Q07912 1038 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 MTMR1Q13613 665 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 HERC3Q15034 1050 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 NEDD8Q15843 81 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 DOK7Q18PE1 504 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 SEL1L3Q68CR1 1132 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 CES3Q6UWW8 571 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 KCTD8Q6ZWB6 473 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 CHST15Q7LFX5 561 aaPredicted RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 BTLAQ7Z6A9 289 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 HOMEZQ8IX15 550 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 CADM3Q8N126 398 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 SLC4A11Q8NBS3 891 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 HPS1Q92902 700 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 WNK4Q96J92 1243 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 UHRF1Q96T88 793 aaPredicted RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 TDRD1Q9BXT4 1180 aaKnown RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 ILKAPQ9H0C8 392 aaPredicted RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 GMPR2Q9P2T1 348 aaKnown RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 SUCOQ9UBS9 1254 aaKnown RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 DAPK2Q9UIK4 370 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 CCPG1Q9ULG6 757 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 UBIAD1Q9Y5Z9 338 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 COPG1Q9Y678 874 aaKnown RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 TCRBV3S1A0A5B6 114 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 HDAC3O15379 428 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 ASS1P00966 412 aaKnown RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 ERVK-10P10266 1014 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 CD19P15391 556 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 YBX3P16989 372 aaKnown RBP eCLIP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 MATN1P21941 496 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 BCAR1P56945 870 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 ORC1Q13415 861 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 PHKG1Q16816 387 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 CDO1Q16878 200 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 C15orf59Q2T9L4 293 aaPredicted RBP12.01□□□□□ -0.49
VTI1A-205ENST00000483122 LDLRAP1Q5SW96 308 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 HHIPL2Q6UWX4 724 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 DCLK2Q8N568 766 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 TNIP2Q8NFZ5 429 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 PGLYRP2Q96PD5 576 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 HGH1Q9BTY7 390 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 NACA2Q9H009 215 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 SIAEQ9HAT2 523 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 ZFYVE28Q9HCC9 887 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 FBXO28Q9NVF7 368 aa12.01□□□□□ -0.49
VTI1A-205ENST00000483122 NXF1Q9UBU9 619 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms