RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 AIF1P55008 147 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 RPL7AP62424 266 aaKnown RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 GNA12Q03113 381 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 SCAPQ12770 1279 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 MAMLD1Q13495 774 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 DLG2Q15700 870 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 EFHC2Q5JST6 749 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 RETSATQ6NUM9 610 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 RWDD4Q6NW29 188 aaKnown RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 ZNF571Q7Z3V5 609 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 SLFN11Q7Z7L1 901 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 DRC7Q8IY82 874 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 ABCA7Q8IZY2 2146 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 ZCCHC9Q8N567 271 aaKnown RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 ATP11CQ8NB49 1132 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 OR8D1Q8WZ84 308 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 SNX19Q92543 992 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 SYN2Q92777 582 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 CCDC114Q96M63 670 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 PSMB7Q99436 277 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 GTPBP2Q9BX10 602 aaKnown RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 C6orf106Q9H6K1 298 aaPredicted RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 SERGEFQ9UGK8 458 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 ADAMTS1Q9UHI8 967 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 EIF2B4Q9UI10 523 aaKnown RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 BZW2Q9Y6E2 419 aaKnown RBP12.18□□□□□ -0.46
HMGN1-213ENST00000482192 RALGAPA1Q6GYQ0 2036 aa12.18□□□□□ -0.46
HMGN1-213ENST00000482192 FRYLO94915 3013 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 NUP205Q92621 2012 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 CBX4O00257 560 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 MCF2LO15068 1137 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 SNAP91O60641 907 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 LRIG2O94898 1065 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 FSBPO95073 299 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 FTLP02792 175 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-213ENST00000482192 PLEKP08567 350 aaPredicted RBP12.17□□□□□ -0.46
HMGN1-213ENST00000482192 SRCP12931 536 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 RHOQP17081 205 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 GOT1P17174 413 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 L1CAMP32004 1257 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 FAM46CQ5VWP2 391 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 PLEKHA7Q6IQ23 1121 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 SCYL2Q6P3W7 929 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 Q6ZVU0 165 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 TMC6Q7Z403 805 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 AADATQ8N5Z0 425 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 OR7D4Q8NG98 312 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 BIRC7Q96CA5 298 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 TBC1D31Q96DN5 1066 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 TRIM11Q96F44 468 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 SPON2Q9BUD6 331 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 ZDHHC5Q9C0B5 715 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 NEUROG2Q9H2A3 272 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 ATP13A1Q9HD20 1204 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 FSCN3Q9NQT6 498 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 IFNKQ9P0W0 207 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 NEU3Q9UQ49 428 aa12.17□□□□□ -0.46
HMGN1-213ENST00000482192 CEP250Q9BV73 2442 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 CXorf51AA0A1B0GTR3 108 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 FAM47DPA6NHR8 397 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 LRRC72A6NJI9 287 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 C1QTNF3-AMACRE9PGA6 284 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 FAM72CH0Y354 149 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 K7ERQ8 282 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 DDX3XO00571 662 aaKnown RBP eCLIP12.16□□□□□ -0.462e-15■□□□□ 10.9
HMGN1-213ENST00000482192 ATMINO43313 823 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-213ENST00000482192 BNIP3LO60238 219 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 RTN2O75298 545 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 MT-CO1P00395 513 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 MYBL1P10243 752 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 SKILP12757 684 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 CD27P26842 260 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 SERPINH1P50454 418 aaKnown RBP12.16□□□□□ -0.46
HMGN1-213ENST00000482192 AFF3P51826 1226 aaKnown RBP12.16□□□□□ -0.46
HMGN1-213ENST00000482192 ZBED6P86452 979 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 OGDHQ02218 1023 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 SLC20A2Q08357 652 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 UAP1L1Q3KQV9 507 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 TDRD12Q587J7 1177 aaKnown RBP12.16□□□□□ -0.46
HMGN1-213ENST00000482192 FAM72AQ5TYM5 149 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 KIAA0895LQ68EN5 471 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 FAM72DQ6L9T8 149 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 LINGO4Q6UY18 593 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 VPS36Q86VN1 386 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 NLRP14Q86W24 1093 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 FAM72BQ86X60 149 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 HDDC3Q8N4P3 179 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 MINDY1Q8N5J2 469 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 OR2T34Q8NGX1 318 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 OSGEPQ9NPF4 335 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 TMEM248Q9NWD8 314 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 CNOT8Q9UFF9 292 aaKnown RBP12.16□□□□□ -0.46
HMGN1-213ENST00000482192 PPM1HQ9ULR3 514 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 CAPN11Q9UMQ6 739 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 FARP1Q9Y4F1 1045 aaPredicted RBP12.16□□□□□ -0.46
HMGN1-213ENST00000482192 SCINQ9Y6U3 715 aa12.16□□□□□ -0.46
HMGN1-213ENST00000482192 SPTBN4Q9H254 2564 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 TMEM191CA6NGB0 347 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 SLC7A4O43246 635 aa12.15□□□□□ -0.46
HMGN1-213ENST00000482192 OPHN1O60890 802 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms