RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 LHX5Q9H2C1 402 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 AGO4Q9HCK5 861 aaKnown RBP10.84□□□□□ -0.67
SIK3-210ENST00000480468 MTMR10Q9NXD2 777 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 ADA2Q9NZK5 511 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 PCSK1NQ9UHG2 260 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 CDYLQ9Y232 598 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 SEC14L2O76054 403 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 TOMM70O94826 608 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 ATG7O95352 703 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 AMHP03971 560 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 GNAO1P09471 354 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 CKMT2P17540 419 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 RBL1P28749 1068 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 ADORA2AP29274 412 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 WNT7BP56706 349 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 MPP1Q00013 466 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 FSTL1Q12841 308 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 SPP2Q13103 211 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 PRKAA1Q13131 559 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 TAF5Q15542 800 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 PTPN20Q4JDL3 420 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 ZNF618Q5T7W0 954 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 HHIPL2Q6UWX4 724 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 ITIH5Q86UX2 942 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 CCDC24Q8N4L8 307 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 LPGAT1Q92604 370 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 NAT9Q9BTE0 207 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 WDR12Q9GZL7 423 aaKnown RBP10.84□□□□□ -0.67
SIK3-210ENST00000480468 EHD1Q9H4M9 534 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 PI4KBQ9UBF8 816 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 CD300AQ9UGN4 299 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 C1orf232A0A0U1RR37 186 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 RGS13O14921 159 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 GRID2O43424 1007 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 JRKO75564 520 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 LDHAP00338 332 aaKnown RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 ASS1P00966 412 aaKnown RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 POLR2EP19388 210 aaKnown RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 TCN1P20061 433 aaPredicted RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 RPL10P27635 214 aaKnown RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 TCF7P36402 384 aaPredicted RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 GP5P40197 560 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 CDH6P55285 790 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 MMRN1Q13201 1228 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 SEMA5AQ13591 1074 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 PRKG1Q13976 671 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 STILQ15468 1287 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 UGCGQ16739 394 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 SHROOM1Q2M3G4 852 aaPredicted RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 PPM1JQ5JR12 505 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 CLEC14AQ86T13 490 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 CDKL3Q8IVW4 592 aaPredicted RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 GOLM1Q8NBJ4 401 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 FAM156AQ8NDB6 213 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 RDH11Q8TC12 318 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 HPS1Q92902 700 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 GATA5Q9BWX5 397 aaPredicted RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 NDEL1Q9GZM8 345 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 SMARCAD1Q9H4L7 1026 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 HMG20AQ9NP66 347 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 ASNSD1Q9NWL6 643 aa10.83□□□□□ -0.68
SIK3-210ENST00000480468 COL14A1Q05707 1796 aaKnown RBP10.83□□□□□ -0.68
SIK3-210ENST00000480468 TMEM150BA6NC51 233 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 E7ENX8 843 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 H0YIN7 160 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 NEMP1O14524 444 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 MPOP05164 745 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 APOA4P06727 396 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 MPSTP25325 297 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 JAK3P52333 1124 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 AP3M2P53677 418 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 STX5Q13190 355 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 MAPRE2Q15555 327 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 GRTP1Q5TC63 336 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 TAS1R3Q7RTX0 852 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 CCDC60Q8IWA6 550 aaPredicted RBP10.82□□□□□ -0.68
SIK3-210ENST00000480468 CBR4Q8N4T8 237 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 TMCO5AQ8N6Q1 288 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 SNX31Q8N9S9 440 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 PPWD1Q96BP3 646 aaKnown RBP10.82□□□□□ -0.68
SIK3-210ENST00000480468 PGBD4Q96DM1 585 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 SH3YL1Q96HL8 342 aaPredicted RBP10.82□□□□□ -0.68
SIK3-210ENST00000480468 NPAS2Q99743 824 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 CPNE1Q99829 537 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 C9orf16Q9BUW7 83 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 IL22Q9GZX6 179 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 KLHL25Q9H0H3 589 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 PCDHAC1Q9H158 963 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 UPF3AQ9H1J1 476 aaKnown RBP10.82□□□□□ -0.68
SIK3-210ENST00000480468 RAD21L1Q9H4I0 556 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 MOV10Q9HCE1 1003 aaKnown RBP10.82□□□□□ -0.68
SIK3-210ENST00000480468 SNX15Q9NRS6 342 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.82□□□□□ -0.68
SIK3-210ENST00000480468 OXSMQ9NWU1 459 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 AGO2Q9UKV8 859 aaKnown RBP10.82□□□□□ -0.68
SIK3-210ENST00000480468 TRAF6Q9Y4K3 522 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 COPG1Q9Y678 874 aaKnown RBP10.82□□□□□ -0.68
SIK3-210ENST00000480468 ADGRA2Q96PE1 1338 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 ZNF541Q9H0D2 1346 aa10.82□□□□□ -0.68
SIK3-210ENST00000480468 TESPA1A2RU30 521 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms