RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 CAND1Q86VP6 1230 aaKnown RBP21.61■■□□□ 1.05
SDF4-206ENST00000478938 EPHX4Q8IUS5 362 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 C12orf56Q8IXR9 622 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 ANKFN1Q8N957 763 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 TDRD5Q8NAT2 981 aaKnown RBP21.61■■□□□ 1.05
SDF4-206ENST00000478938 TMC2Q8TDI7 906 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 FNIP1Q8TF40 1166 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 WDR12Q9GZL7 423 aaKnown RBP21.61■■□□□ 1.05
SDF4-206ENST00000478938 SOX17Q9H6I2 414 aaPredicted RBP21.61■■□□□ 1.05
SDF4-206ENST00000478938 EFCAB1Q9HAE3 211 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 PCDHB12Q9Y5F1 795 aa21.61■■□□□ 1.05
SDF4-206ENST00000478938 FAM149AA5PLN7 773 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 FAM159BA6NKW6 160 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 CENPBD1B2RD01 187 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 GCNT1Q02742 428 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 PRKG1Q13976 671 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 RFX6Q8HWS3 928 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 GRAMD2AQ8IUY3 354 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 TNS4Q8IZW8 715 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 ABRAQ8N0Z2 381 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 MPP5Q8N3R9 675 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 CXorf38Q8TB03 319 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 UHRF1Q96T88 793 aaPredicted RBP21.6■■□□□ 1.05
SDF4-206ENST00000478938 APBA2Q99767 749 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 RBAKQ9NYW8 714 aaPredicted RBP21.6■■□□□ 1.05
SDF4-206ENST00000478938 ZNF652Q9Y2D9 606 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 SLC15A5A6NIM6 579 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 E7ENX8 843 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 CCRL2O00421 344 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 TPPPO94811 219 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 SERPINB1P30740 379 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 PPP4CP60510 307 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 SLC36A3Q495N2 470 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 ABRAXAS1Q6UWZ7 409 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 RAB2BQ8WUD1 216 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 ZUFSPQ96AP4 578 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 FBXL18Q96ME1 805 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 TCF12Q99081 682 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 BEGAINQ9BUH8 593 aa21.6■■□□□ 1.05
SDF4-206ENST00000478938 GPN2Q9H9Y4 310 aaPredicted RBP21.6■■□□□ 1.05
SDF4-206ENST00000478938 CPNE6O95741 557 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 SREBF1P36956 1147 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 CEP78Q5JTW2 689 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 STXBP5Q5T5C0 1151 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 DARS2Q6PI48 645 aaKnown RBP21.59■■□□□ 1.05
SDF4-206ENST00000478938 BRINP3Q76B58 766 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 MFSD2AQ8NA29 543 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 SPATA18Q8TC71 538 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 HTRA1Q92743 480 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 TUBA1CQ9BQE3 449 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 AP4E1Q9UPM8 1137 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 RBBP6Q7Z6E9 1792 aaKnown RBP21.59■■□□□ 1.05
SDF4-206ENST00000478938 IL1R2P27930 398 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 IFNA8P32881 189 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 C1QBPQ07021 282 aaKnown RBP21.59■■□□□ 1.05
SDF4-206ENST00000478938 RTFDC1Q9BY42 306 aaPredicted RBP21.59■■□□□ 1.05
SDF4-206ENST00000478938 LHPPQ9H008 270 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 GLT8D2Q9H1C3 349 aa21.59■■□□□ 1.05
SDF4-206ENST00000478938 SUCOQ9UBS9 1254 aaKnown RBP21.59■■□□□ 1.05
SDF4-206ENST00000478938 SEC14L2O76054 403 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 CDH1P12830 882 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 EEF1B2P24534 225 aaKnown RBP21.58■■□□□ 1.05
SDF4-206ENST00000478938 MPSTP25325 297 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 GNA15P30679 374 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 SERPINB9P50453 376 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 PSME3P61289 254 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 CHRNEQ04844 493 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 PLCL1Q15111 1095 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 VPS72Q15906 364 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 DDX59Q5T1V6 619 aaKnown RBP eCLIP21.58■■□□□ 1.05
SDF4-206ENST00000478938 DNAJC24Q6P3W2 148 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 TIFABQ6ZNK6 161 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 PARP8Q8N3A8 854 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 TXNDC15Q96J42 360 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 SH2D3AQ9BRG2 576 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 PCDHGA7Q9Y5G6 932 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 TANC1Q9C0D5 1861 aa21.58■■□□□ 1.05
SDF4-206ENST00000478938 TCRBV3S1A0A5B6 114 aa21.58■■□□□ 1.04
SDF4-206ENST00000478938 TCAF2A6NFQ2 919 aa21.58■■□□□ 1.04
SDF4-206ENST00000478938 CHADO15335 359 aa21.58■■□□□ 1.04
SDF4-206ENST00000478938 SLC13A2Q13183 592 aa21.58■■□□□ 1.04
SDF4-206ENST00000478938 ERFEQ4G0M1 354 aa21.58■■□□□ 1.04
SDF4-206ENST00000478938 TREML2Q5T2D2 321 aa21.58■■□□□ 1.04
SDF4-206ENST00000478938 NXNQ6DKJ4 435 aa21.58■■□□□ 1.04
SDF4-206ENST00000478938 CCSAPQ6IQ19 270 aaPredicted RBP21.58■■□□□ 1.04
SDF4-206ENST00000478938 DCP2Q8IU60 420 aaKnown RBP21.58■■□□□ 1.04
SDF4-206ENST00000478938 CMASQ8NFW8 434 aaPredicted RBP21.58■■□□□ 1.04
SDF4-206ENST00000478938 CNDP2Q96KP4 475 aaKnown RBP21.58■■□□□ 1.04
SDF4-206ENST00000478938 CDK5RAP1Q96SZ6 601 aaKnown RBP21.58■■□□□ 1.04
SDF4-206ENST00000478938 WDR18Q9BV38 432 aa21.58■■□□□ 1.04
SDF4-206ENST00000478938 IFT80Q9P2H3 777 aaPredicted RBP21.58■■□□□ 1.04
SDF4-206ENST00000478938 ASNA1O43681 348 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 SCO2O43819 266 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 APRTP07741 180 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 ROR1Q01973 937 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 PADI6Q6TGC4 694 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 TMEM270Q6UE05 265 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 CYP4V2Q6ZWL3 525 aaPredicted RBP21.57■■□□□ 1.04
SDF4-206ENST00000478938 NATD1Q8N6N6 113 aa21.57■■□□□ 1.04
SDF4-206ENST00000478938 MTRRQ9UBK8 725 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms