RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 TRPC3Q13507 836 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 PSMD6Q15008 389 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 TCEA2Q15560 299 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 SPOPLQ6IQ16 392 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 FAM114A1Q8IWE2 563 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 GALNT11Q8NCW6 608 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 FRS2Q8WU20 508 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 CALML4Q96GE6 196 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 CPEB1Q9BZB8 566 aaKnown RBP12.62□□□□□ -0.39
HDAC8-217ENST00000478743 STRADBQ9C0K7 418 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 VRTNQ9H8Y1 702 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 PNPLA8Q9NP80 782 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 CUEDC1Q9NWM3 386 aaPredicted RBP12.62□□□□□ -0.39
HDAC8-217ENST00000478743 DONSONQ9NYP3 566 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 PADI4Q9UM07 663 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 VPS4AQ9UN37 437 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 PCDHB13Q9Y5F0 798 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 CSNK1G3Q9Y6M4 447 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 CROCCQ5TZA2 2017 aa12.62□□□□□ -0.39
HDAC8-217ENST00000478743 PCNX1Q96RV3 2341 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 LRP4O75096 1905 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 SPTY2D1-AS1A0A0U1RR47 76 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 A6NNZ2 444 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.61□□□□□ -0.39
HDAC8-217ENST00000478743 DIAPH2O60879 1101 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 CLSTN1O94985 981 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 CD2BP2O95400 341 aaKnown RBP12.61□□□□□ -0.39
HDAC8-217ENST00000478743 SRPRAP08240 638 aaKnown RBP12.61□□□□□ -0.39
HDAC8-217ENST00000478743 JUNDP17535 347 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 GJB2P29033 226 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 OAS2P29728 719 aaKnown RBP12.61□□□□□ -0.39
HDAC8-217ENST00000478743 AKT2P31751 481 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 ADKP55263 362 aaKnown RBP12.61□□□□□ -0.39
HDAC8-217ENST00000478743 MRPL49Q13405 166 aaKnown RBP12.61□□□□□ -0.39
HDAC8-217ENST00000478743 C16orf72Q14CZ0 275 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 ANKRD1Q15327 319 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 SURF1Q15526 300 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 SNRNP35Q16560 246 aaKnown RBP12.61□□□□□ -0.39
HDAC8-217ENST00000478743 ZNF667Q5HYK9 610 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 SV2AQ7L0J3 742 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 PARGQ86W56 976 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 CARNMT1Q8N4J0 409 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 KDM1BQ8NB78 822 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 WDR48Q8TAF3 677 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 FIBINQ8TAL6 211 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 EDEM1Q92611 657 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 NAT6Q93015 286 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 SYAP1Q96A49 352 aaPredicted RBP12.61□□□□□ -0.39
HDAC8-217ENST00000478743 CDK5RAP1Q96SZ6 601 aaKnown RBP12.61□□□□□ -0.39
HDAC8-217ENST00000478743 IL12RB2Q99665 862 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 LRRC61Q9BV99 259 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 SLC4A5Q9BY07 1137 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 CLPBQ9H078 707 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 NCKIPSDQ9NZQ3 722 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 TRPM6Q9BX84 2022 aa12.61□□□□□ -0.39
HDAC8-217ENST00000478743 UNC13CQ8NB66 2214 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 PDGFAP04085 211 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 CTSLP07711 333 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 CCL4P13236 92 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 ATICP31939 592 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 ECT2LQ008S8 904 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 EIF2S3LQ2VIR3 472 aaKnown RBP12.6□□□□□ -0.39
HDAC8-217ENST00000478743 KYAT3Q6YP21 454 aaKnown RBP12.6□□□□□ -0.39
HDAC8-217ENST00000478743 HEATR4Q86WZ0 1026 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 HORMAD1Q86X24 394 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 CFAP52Q8N1V2 620 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 CYFIP2Q96F07 1278 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 SPAG5Q96R06 1193 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 OLFML3Q9NRN5 406 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 SIRPGQ9P1W8 387 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 ERRFI1Q9UJM3 462 aaPredicted RBP12.6□□□□□ -0.39
HDAC8-217ENST00000478743 MTORP42345 2549 aa12.6□□□□□ -0.39
HDAC8-217ENST00000478743 H3BM21 787 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 TULP2O00295 520 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 TPP1O14773 563 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 LDLRP01130 860 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 UBA7P41226 1012 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 ASPAP45381 313 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 ZFP36L1Q07352 338 aaKnown RBP12.59□□□□□ -0.39
HDAC8-217ENST00000478743 CDC20Q12834 499 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 PDE1CQ14123 709 aaPredicted RBP12.59□□□□□ -0.39
HDAC8-217ENST00000478743 DEFB109BQ30KR1 87 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 TMEM259Q4ZIN3 620 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 PRR30Q53SZ7 412 aaPredicted RBP12.59□□□□□ -0.39
HDAC8-217ENST00000478743 PPP1R26Q5T8A7 1209 aaPredicted RBP12.59□□□□□ -0.39
HDAC8-217ENST00000478743 NYAP1Q6ZVC0 841 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 UNKQ9C0B0 810 aaKnown RBP12.59□□□□□ -0.39
HDAC8-217ENST00000478743 GULP1Q9UBP9 304 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 APOBEC3BQ9UH17 382 aaKnown RBP12.59□□□□□ -0.39
HDAC8-217ENST00000478743 PPM1HQ9ULR3 514 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 CEP83Q9Y592 693 aa12.59□□□□□ -0.39
HDAC8-217ENST00000478743 ZNF891A8MT65 544 aaPredicted RBP12.58□□□□□ -0.4
HDAC8-217ENST00000478743 STMND1H3BQB6 276 aa12.58□□□□□ -0.4
HDAC8-217ENST00000478743 YY2O15391 372 aa12.58□□□□□ -0.4
HDAC8-217ENST00000478743 EPB41L2O43491 1005 aaKnown RBP12.58□□□□□ -0.4
HDAC8-217ENST00000478743 DDAH2O95865 285 aa12.58□□□□□ -0.4
HDAC8-217ENST00000478743 IDEP14735 1019 aa12.58□□□□□ -0.4
HDAC8-217ENST00000478743 GAP43P17677 238 aa12.58□□□□□ -0.4
HDAC8-217ENST00000478743 ITGB7P26010 798 aa12.58□□□□□ -0.4
HDAC8-217ENST00000478743 CYP2J2P51589 502 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms