RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PGAM1P18669 254 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 TMED10P49755 219 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 KCNC4Q03721 635 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 BNIP3Q12983 259 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 GPR107Q5VW38 600 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 NIPAL1Q6NVV3 410 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 TANKQ92844 425 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 NPLQ9BXD5 320 aaPredicted RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 PCDHGA7Q9Y5G6 932 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 COPG1Q9Y678 874 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 SIP14410 1827 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 GARSP41250 739 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 DUOXA2Q1HG44 320 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 FER1L6Q2WGJ9 1857 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 BSPRYQ5W0U4 402 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 TTC33Q6PID6 262 aaPredicted RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 CES3Q6UWW8 571 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 PCDH20Q8N6Y1 951 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 ZNF420Q8TAQ5 688 aaPredicted RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 SREK1Q8WXA9 508 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 HEPHQ9BQS7 1158 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 PXMP2Q9NR77 195 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 PTBP2Q9UKA9 531 aaKnown RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 HES2Q9Y543 173 aa18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 COL2A1P02458 1487 aaPredicted RBP18.95■□□□□ 0.62
ECHDC1-214ENST00000474289 J3QRK9 145 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 SULT1C4O75897 302 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 MICAL2O94851 1124 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 TFEBP19484 476 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 DCKP27707 260 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 NAMPTP43490 491 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 BMXP51813 675 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 CDH8P55286 799 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 PSME3P61289 254 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 TFAMQ00059 246 aaKnown RBP18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 NSUN2Q08J23 767 aaKnown RBP eCLIP18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 PMS2P3Q13401 168 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 DLG2Q15700 870 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 CHSY3Q70JA7 882 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 ZBTB33Q86T24 672 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 ISL2Q96A47 359 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 FBXL8Q96CD0 374 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 UHRF1Q96T88 793 aaPredicted RBP18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 TMEM39BQ9GZU3 492 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 DHX35Q9H5Z1 703 aaKnown RBP18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 CNOT6Q9ULM6 557 aaKnown RBP18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 CDYLQ9Y232 598 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 E7ENX8 843 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 AKAP10O43572 662 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 PIGNO95427 931 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 CD300CQ08708 224 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 BCL2A1Q16548 175 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 PPP4R4Q6NUP7 873 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 CYP2R1Q6VVX0 501 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 ZBTB46Q86UZ6 589 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 LPGAT1Q92604 370 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 TWNKQ96RR1 684 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 SMOXQ9NWM0 555 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 OXSMQ9NWU1 459 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 MORF4L1Q9UBU8 362 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 HMGXB4Q9UGU5 601 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 ZDHHC2Q9UIJ5 367 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 KIAA1217Q5T5P2 1943 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 CNTNAP1P78357 1384 aa18.94■□□□□ 0.62
ECHDC1-214ENST00000474289 A0A096LPK6 155 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 YDJCA8MPS7 323 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 M0QYV0 167 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 H2AFYO75367 372 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 PSAPP07602 524 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 MLNP12872 115 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 SLC7A1P30825 629 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 PSMD8P48556 350 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 RALGDSQ12967 914 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 ITGA7Q13683 1181 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 ARL13AQ5H913 290 aaPredicted RBP18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 TREML2Q5T2D2 321 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 KCNT2Q6UVM3 1135 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 TMEM26Q6ZUK4 368 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 CLEC14AQ86T13 490 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 PPWD1Q96BP3 646 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 PGLYRP2Q96PD5 576 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 CPNE1Q99829 537 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 SNRNP25Q9BV90 132 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 NAA50Q9GZZ1 169 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 DRC3Q9H069 523 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 PORCNQ9H237 461 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 CAB39LQ9H9S4 337 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 NMRAL1Q9HBL8 299 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 NGRNQ9NPE2 291 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 CORINQ9Y5Q5 1042 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 TCRBV3S1A0A5B6 114 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 KCNU1A8MYU2 1149 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 CLASP2O75122 1294 aaKnown RBP18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 YBX3P16989 372 aaKnown RBP eCLIP18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 GPD2P43304 727 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 RAB39AQ14964 217 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 MOGQ16653 247 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 BOLA3Q53S33 107 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 GRTP1Q5TC63 336 aa18.93■□□□□ 0.62
ECHDC1-214ENST00000474289 ARHGEF16Q5VV41 709 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms