RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 NEK5Q6P3R8 708 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 INO80CQ6PI98 192 aaPredicted RBP14.89□□□□□ -0.03
SMC1A-204ENST00000463684 IGF2-ASQ6U949 168 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 CCDC81Q6ZN84 652 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 CCAR2Q8N163 923 aaKnown RBP14.89□□□□□ -0.03
SMC1A-204ENST00000463684 ATP6V0D2Q8N8Y2 350 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 IFI44Q8TCB0 444 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 IFT43Q96FT9 208 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 SLC46A1Q96NT5 459 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 PCDHB4Q9Y5E5 795 aa14.89□□□□□ -0.03
SMC1A-204ENST00000463684 A0A1W2PQU0 124 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 ATP9BO43861 1147 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 BNIP3LO60238 219 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 PRR29P0C7W0 189 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 GIMD1P0DJR0 217 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 HNRNPA2B1P22626 353 aaKnown RBP14.88□□□□□ -0.03
SMC1A-204ENST00000463684 SYKP43405 635 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 CSRP3P50461 194 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 VASPP50552 380 aaPredicted RBP14.88□□□□□ -0.03
SMC1A-204ENST00000463684 HNRNPKP61978 463 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMC1A-204ENST00000463684 RABGAP1LQ5R372 815 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 TTC39BQ5VTQ0 682 aaPredicted RBP14.88□□□□□ -0.03
SMC1A-204ENST00000463684 KIAA1614Q5VZ46 1190 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 PRICKLE2Q7Z3G6 844 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 TAC4Q86UU9 113 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 DCP2Q8IU60 420 aaKnown RBP14.88□□□□□ -0.03
SMC1A-204ENST00000463684 UBR7Q8N806 425 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 OR13H1Q8NG92 308 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 FAM174AQ8TBP5 190 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMC1A-204ENST00000463684 ST7Q9NRC1 585 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 DNAJC28Q9NX36 388 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 NCKIPSDQ9NZQ3 722 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 SSUH2Q9Y2M2 353 aa14.88□□□□□ -0.03
SMC1A-204ENST00000463684 HEMK1Q9Y5R4 338 aaPredicted RBP14.88□□□□□ -0.03
SMC1A-204ENST00000463684 TCAF2A6NFQ2 919 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 KCNU1A8MYU2 1149 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 K7ESM1 405 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 BRD2P25440 801 aaKnown RBP14.87□□□□□ -0.03
SMC1A-204ENST00000463684 TAS2R38P59533 333 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 DNM1Q05193 864 aaKnown RBP14.87□□□□□ -0.03
SMC1A-204ENST00000463684 DPYDQ12882 1025 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 SYPL2Q5VXT5 272 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 Q6ZVU0 165 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 BEND5Q7L4P6 421 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 HORMAD1Q86X24 394 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 CIR1Q86X95 450 aaPredicted RBP14.87□□□□□ -0.03
SMC1A-204ENST00000463684 ARL14Q8N4G2 192 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 TPCN2Q8NHX9 752 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 CCDC114Q96M63 670 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 FAM117AQ9C073 453 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 FZD3Q9NPG1 666 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 DYRK4Q9NR20 520 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.87□□□□□ -0.03
SMC1A-204ENST00000463684 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.87□□□□□ -0.03
SMC1A-204ENST00000463684 HPSEQ9Y251 543 aa14.87□□□□□ -0.03
SMC1A-204ENST00000463684 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.86□□□□□ -0.03
SMC1A-204ENST00000463684 LY6G6EA0A0G2JKS1 128 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 CPED1A4D0V7 1026 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 A6NNZ2 444 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 KPNA3O00505 521 aaPredicted RBP14.86□□□□□ -0.03
SMC1A-204ENST00000463684 RIOK3O14730 519 aaKnown RBP14.86□□□□□ -0.03
SMC1A-204ENST00000463684 SLC16A3O15427 465 aaKnown RBP14.86□□□□□ -0.03
SMC1A-204ENST00000463684 LZTS3O60299 673 aaPredicted RBP14.86□□□□□ -0.03
SMC1A-204ENST00000463684 PCDH8O95206 1070 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 TGM2P21980 687 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 ACADSBP45954 432 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 CLDN2P57739 230 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 ZNF177Q13360 481 aaPredicted RBP14.86□□□□□ -0.03
SMC1A-204ENST00000463684 ZNF284Q2VY69 593 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 ZNF542PQ5EBM4 170 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 PIP5KL1Q5T9C9 394 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 ZCCHC8Q6NZY4 707 aaKnown RBP14.86□□□□□ -0.03
SMC1A-204ENST00000463684 FOXR1Q6PIV2 292 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 Q6ZSR6 202 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 ATXN7L3BQ96GX2 97 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 TSG101Q99816 390 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 ZSWIM1Q9BR11 485 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 FEM1AQ9BSK4 669 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 VPS28Q9UK41 221 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 PCDHGA8Q9Y5G5 932 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 U3KQA8 63 aa14.86□□□□□ -0.03
SMC1A-204ENST00000463684 MYO18BQ8IUG5 2567 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 H3BM21 787 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 RNF225M0QZC1 329 aaPredicted RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 NEBLO76041 1014 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 TRUB2O95900 331 aaKnown RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 CENPBP07199 599 aaPredicted RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 SLC2A3P11169 496 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 KRT10P13645 584 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 SKOR1P84550 965 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 NFATC3Q12968 1075 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 CDKN3Q16667 212 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 ZSCAN23Q3MJ62 389 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 CXorf57Q6NSI4 855 aaKnown RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 RBM44Q6ZP01 1051 aaKnown RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 PTAR1Q7Z6K3 402 aaPredicted RBP14.85□□□□□ -0.03
SMC1A-204ENST00000463684 ABI3BPQ7Z7G0 1075 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 SLC22A18ASQ8N1D0 253 aa14.85□□□□□ -0.03
SMC1A-204ENST00000463684 PPM1KQ8N3J5 372 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms