RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 FEM1AQ9BSK4 669 aa20.34■□□□□ 0.85
VARS-221ENST00000463184 DDIT4Q9NX09 232 aa20.34■□□□□ 0.85
VARS-221ENST00000463184 NYNRINQ9P2P1 1898 aaKnown RBP20.33■□□□□ 0.85
VARS-221ENST00000463184 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.33■□□□□ 0.85
VARS-221ENST00000463184 PRAMEF26H0Y7S4 382 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 TLX3O43711 291 aaPredicted RBP20.33■□□□□ 0.85
VARS-221ENST00000463184 RNGTTO60942 597 aaKnown RBP20.33■□□□□ 0.85
VARS-221ENST00000463184 ZNF18P17022 549 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 BMP6P22004 513 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 ACP1P24666 158 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 ITPKBP27987 946 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 CNTN1Q12860 1018 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 ZNF177Q13360 481 aaPredicted RBP20.33■□□□□ 0.85
VARS-221ENST00000463184 AUHQ13825 339 aaKnown RBP20.33■□□□□ 0.85
VARS-221ENST00000463184 DLG2Q15700 870 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 RFFLQ8WZ73 363 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 PREBQ9HCU5 417 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 CTNND2Q9UQB3 1225 aa20.33■□□□□ 0.85
VARS-221ENST00000463184 SYNJ2BP-COX16A0A087WUM0 186 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 HSF2BPO75031 334 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 PROX2Q3B8N5 592 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 BAP1Q92560 729 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 KLHDC7BQ96G42 594 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 PPP1R13BQ96KQ4 1090 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 SRRTQ9BXP5 876 aaKnown RBP20.32■□□□□ 0.84
VARS-221ENST00000463184 PRORYQ9H606 182 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 ACP6Q9NPH0 428 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 COX16Q9P0S2 106 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 VPS28Q9UK41 221 aa20.32■□□□□ 0.84
VARS-221ENST00000463184 ARID1BQ8NFD5 2236 aaPredicted RBP20.32■□□□□ 0.84
VARS-221ENST00000463184 TK2O00142 265 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 CLDN11O75508 207 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 FGFR1OPO95684 399 aaKnown RBP20.31■□□□□ 0.84
VARS-221ENST00000463184 STX17P56962 302 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 E2F1Q01094 437 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 CENPCQ03188 943 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 CCDC15Q0P6D6 951 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 PAK1Q13153 545 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 ZNF211Q13398 564 aaPredicted RBP20.31■□□□□ 0.84
VARS-221ENST00000463184 CCDC183Q5T5S1 534 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 NEK5Q6P3R8 708 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 Q6ZVU0 165 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 WDTC1Q8N5D0 677 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 SH2D3CQ8N5H7 860 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 OR52K2Q8NGK3 314 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 SNIP1Q8TAD8 396 aaKnown RBP20.31■□□□□ 0.84
VARS-221ENST00000463184 CPXM1Q96SM3 734 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 VANGL2Q9ULK5 521 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 CLCA2Q9UQC9 943 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 TBC1D30Q9Y2I9 924 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 FARP1Q9Y4F1 1045 aaPredicted RBP20.31■□□□□ 0.84
VARS-221ENST00000463184 OR51B4Q9Y5P0 310 aa20.31■□□□□ 0.84
VARS-221ENST00000463184 GLDCP23378 1020 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 CDH4P55283 916 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 KRT83P78385 493 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 POM121L1PQ3SYA9 428 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 C5orf22Q49AR2 442 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 HS1BP3Q53T59 392 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 TRIM65Q6PJ69 517 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 RBM43Q6ZSC3 357 aaKnown RBP20.3■□□□□ 0.84
VARS-221ENST00000463184 TMEM145Q8NBT3 493 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 FGF11Q92914 225 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 NOX5Q96PH1 765 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 PCDHGC3Q9UN70 934 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 HS3ST2Q9Y278 367 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 HS3ST4Q9Y661 456 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 BPTFQ12830 3046 aa20.3■□□□□ 0.84
VARS-221ENST00000463184 MYLKQ15746 1914 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 SHROOM3Q8TF72 1996 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 BECN2A8MW95 431 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 SIGLEC6O43699 453 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 SDC3O75056 442 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 GRAP2O75791 330 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 USP8P40818 1118 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 IRAK1P51617 712 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 SNX16P57768 344 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 TAS2R38P59533 333 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 INSM1Q01101 510 aaPredicted RBP20.29■□□□□ 0.84
VARS-221ENST00000463184 C19orf57Q0VDD7 668 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 NME3Q13232 169 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 SMYD5Q6GMV2 418 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 C11orf57Q6ZUT1 292 aaPredicted RBP20.29■□□□□ 0.84
VARS-221ENST00000463184 SLC25A45Q8N413 288 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 DCBLD1Q8N8Z6 715 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 CCDC114Q96M63 670 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 MUC3BQ9H195 1237 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 KLHL11Q9NVR0 708 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 CA5BQ9Y2D0 317 aa20.29■□□□□ 0.84
VARS-221ENST00000463184 TRIM38O00635 465 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 BNIP3LO60238 219 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 PAGE1O75459 146 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 THEGLP0DJG4 465 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 SRCP12931 536 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 NOS2P35228 1153 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 ACTN2P35609 894 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 ARHGAP44Q17R89 818 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 KLHL40Q2TBA0 621 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 PIP5KL1Q5T9C9 394 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 OR6B2Q6IFH4 312 aa20.28■□□□□ 0.84
VARS-221ENST00000463184 GJB7Q6PEY0 223 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms