RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 PYROXD2Q8N2H3 581 aa12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 STK40Q8N2I9 435 aa12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 GANCQ8TET4 914 aa12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 SPON2Q9BUD6 331 aa12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 ISCUQ9H1K1 167 aa12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 PABPC3Q9H361 631 aaKnown RBP12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 ATP13A1Q9HD20 1204 aa12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 RXFP3Q9NSD7 469 aa12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 GPATCH2LQ9NWQ4 482 aa12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 WSB2Q9NYS7 404 aaPredicted RBP12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 ARHGAP20Q9P2F6 1191 aa12.23□□□□□ -0.45
LSP1P3-201ENST00000449530 MAP1BP46821 2468 aaKnown RBP12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 PCDH15Q96QU1 1955 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 A0A087X0T9 212 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 LNP1A1A4G5 178 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 ILVBLA1L0T0 632 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 TMEM191CA6NGB0 347 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 CBX4O00257 560 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 KHNYNO15037 678 aaKnown RBP12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 MID1O15344 667 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 CREB3O43889 395 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 BNIP3LO60238 219 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 CFIP05156 583 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 TPM1P09493 284 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 FAM228BP0C875 321 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 SRCP12931 536 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 RHOQP17081 205 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 DPP6P42658 865 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 MAPKAPK2P49137 400 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 GNA12Q03113 381 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 ZBTB16Q05516 673 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 ELAVL3Q14576 367 aaKnown RBP12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 CST6Q15828 149 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 TRIM61Q5EBN2 209 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 ZNF783Q6ZMS7 281 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 NLRP14Q86W24 1093 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 RGL4Q8IZJ4 473 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 SH2D3CQ8N5H7 860 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 ATP11CQ8NB49 1132 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 NETO1Q8TDF5 533 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 FRS2Q8WU20 508 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 PTPRN2Q92932 1015 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 EPAS1Q99814 870 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 EDEM2Q9BV94 578 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 THAP2Q9H0W7 228 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 TMEM74BQ9NUR3 256 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 NDFIP2Q9NV92 336 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 SERGEFQ9UGK8 458 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 DNAI1Q9UI46 699 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 PILRBQ9UKJ0 227 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 FZD10Q9ULW2 581 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 HS3ST2Q9Y278 367 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 PI4KAP42356 2102 aa12.22□□□□□ -0.45
LSP1P3-201ENST00000449530 TP53BP1Q12888 1972 aaPredicted RBP12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 A0A1W2PP55 124 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 K7ERQ8 282 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 ATP9BO43861 1147 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 RNASEH2AO75792 299 aaKnown RBP12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 SEMA4FO95754 770 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 MT-CO1P00395 513 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 IL1BP01584 269 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 EPHB2P29323 1055 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 L1CAMP32004 1257 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 ACSL1P33121 698 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 EIF4A3P38919 411 aaKnown RBP12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 AIF1P55008 147 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 DLG2Q15700 870 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 SYCP2LQ5T4T6 812 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 DCAF12L1Q5VU92 463 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 DAB2IPQ5VWQ8 1189 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 PEAR1Q5VY43 1037 aaPredicted RBP12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 IL31Q6EBC2 164 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 C22orf39Q6P5X5 142 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 FNIP1Q8TF40 1166 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 OR8D1Q8WZ84 308 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 SNX19Q92543 992 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 FOXJ1Q92949 421 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 ZNF419Q96HQ0 510 aaPredicted RBP12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 PEBP4Q96S96 227 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 DNAJC7Q99615 494 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 SNRNP25Q9BV90 132 aaKnown RBP12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 C6orf106Q9H6K1 298 aaPredicted RBP12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 MRPL47Q9HD33 250 aaKnown RBP12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 TMEM248Q9NWD8 314 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 FBXL12Q9NXK8 326 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 PCSK1NQ9UHG2 260 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 SCML1Q9UN30 329 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 AP4E1Q9UPM8 1137 aa12.21□□□□□ -0.45
LSP1P3-201ENST00000449530 PLXNA2O75051 1894 aa12.21□□□□□ -0.46
LSP1P3-201ENST00000449530 GON4LQ3T8J9 2241 aa12.21□□□□□ -0.46
LSP1P3-201ENST00000449530 SMAD6O43541 496 aaKnown RBP12.2□□□□□ -0.46
LSP1P3-201ENST00000449530 RAMP2O60895 175 aa12.2□□□□□ -0.46
LSP1P3-201ENST00000449530 MFAP3LO75121 409 aa12.2□□□□□ -0.46
LSP1P3-201ENST00000449530 RNF8O76064 485 aa12.2□□□□□ -0.46
LSP1P3-201ENST00000449530 ADH1BP00325 375 aa12.2□□□□□ -0.46
LSP1P3-201ENST00000449530 C7P10643 843 aa12.2□□□□□ -0.46
LSP1P3-201ENST00000449530 MAOBP27338 520 aa12.2□□□□□ -0.46
LSP1P3-201ENST00000449530 MIPP30301 263 aa12.2□□□□□ -0.46
LSP1P3-201ENST00000449530 HNRNPH3P31942 346 aaKnown RBP12.2□□□□□ -0.46
LSP1P3-201ENST00000449530 SLC8A1P32418 973 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms