RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 FNBP1LQ5T0N5 605 aa25.42■■□□□ 1.66
RFFL-206ENST00000447669 TMEM184AQ6ZMB5 413 aa25.42■■□□□ 1.66
RFFL-206ENST00000447669 TXLNGYQ9BZA5 131 aa25.42■■□□□ 1.66
RFFL-206ENST00000447669 SEMA4AQ9H3S1 761 aa25.42■■□□□ 1.66
RFFL-206ENST00000447669 UBP1Q9NZI7 540 aa25.42■■□□□ 1.66
RFFL-206ENST00000447669 WNT6Q9Y6F9 365 aa25.42■■□□□ 1.66
RFFL-206ENST00000447669 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.41■■□□□ 1.66
RFFL-206ENST00000447669 H0Y626 953 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 TBX10O75333 385 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 AVILO75366 819 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 STK10O94804 968 aaKnown RBP25.41■■□□□ 1.66
RFFL-206ENST00000447669 PAPLNO95428 1278 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 RHOCP08134 193 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 MZF1P28698 734 aaPredicted RBP25.41■■□□□ 1.66
RFFL-206ENST00000447669 FASTKD3Q14CZ7 662 aaKnown RBP25.41■■□□□ 1.66
RFFL-206ENST00000447669 MSS51Q4VC12 460 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 RNF219Q5W0B1 726 aaPredicted RBP25.41■■□□□ 1.66
RFFL-206ENST00000447669 TMEM25Q86YD3 366 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.41■■□□□ 1.66
RFFL-206ENST00000447669 PIH1D1Q9NWS0 290 aaKnown RBP25.41■■□□□ 1.66
RFFL-206ENST00000447669 E2F8A0AVK6 867 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 TTC24A2A3L6 582 aaPredicted RBP25.41■■□□□ 1.66
RFFL-206ENST00000447669 SOX1O00570 391 aaPredicted RBP25.41■■□□□ 1.66
RFFL-206ENST00000447669 OPHN1O60890 802 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 ETFBP38117 255 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 SLC10A7Q0GE19 358 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 SPARCL1Q14515 664 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 FAM78AQ5JUQ0 283 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 IL31Q6EBC2 164 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 HDXQ7Z353 690 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 MICALL1Q8N3F8 863 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 HJURPQ8NCD3 748 aaPredicted RBP25.41■■□□□ 1.66
RFFL-206ENST00000447669 SP110Q9HB58 689 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 MTCH2Q9Y6C9 303 aa25.41■■□□□ 1.66
RFFL-206ENST00000447669 NFKB1P19838 968 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 IGFBP4P22692 258 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 HOXD9P28356 352 aaPredicted RBP25.4■■□□□ 1.66
RFFL-206ENST00000447669 HSD17B3P37058 310 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 HSPA9P38646 679 aaKnown RBP25.4■■□□□ 1.66
RFFL-206ENST00000447669 CAV1Q03135 178 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 LRIT3Q3SXY7 679 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 CHST9Q7L1S5 443 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 ZCCHC9Q8N567 271 aaKnown RBP25.4■■□□□ 1.66
RFFL-206ENST00000447669 PDCD7Q8N8D1 485 aaKnown RBP25.4■■□□□ 1.66
RFFL-206ENST00000447669 UBLCP1Q8WVY7 318 aaPredicted RBP25.4■■□□□ 1.66
RFFL-206ENST00000447669 TEKT5Q96M29 485 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 FERMT1Q9BQL6 677 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 RBM22Q9NW64 420 aaKnown RBP eCLIP25.4■■□□□ 1.662e-7■■■■□ 22.2
RFFL-206ENST00000447669 CLDND1Q9NY35 253 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 TBC1D30Q9Y2I9 924 aa25.4■■□□□ 1.66
RFFL-206ENST00000447669 PPFIA2O75334 1257 aa25.39■■□□□ 1.66
RFFL-206ENST00000447669 HLA-DQB2P05538 268 aa25.39■■□□□ 1.66
RFFL-206ENST00000447669 PARP15Q460N3 678 aa25.39■■□□□ 1.66
RFFL-206ENST00000447669 PCGF5Q86SE9 256 aa25.39■■□□□ 1.66
RFFL-206ENST00000447669 UHMK1Q8TAS1 419 aaKnown RBP25.39■■□□□ 1.66
RFFL-206ENST00000447669 RBM15Q96T37 977 aaKnown RBP eCLIP25.39■■□□□ 1.66
RFFL-206ENST00000447669 RSPH14Q9UHP6 348 aa25.39■■□□□ 1.66
RFFL-206ENST00000447669 HPCAL4Q9UM19 191 aa25.39■■□□□ 1.66
RFFL-206ENST00000447669 SHOC2Q9UQ13 582 aa25.39■■□□□ 1.66
RFFL-206ENST00000447669 ZNF510Q9Y2H8 683 aa25.39■■□□□ 1.66
RFFL-206ENST00000447669 DOCK8Q8NF50 2099 aa25.39■■□□□ 1.66
RFFL-206ENST00000447669 LUC7L3O95232 432 aaKnown RBP25.39■■□□□ 1.65
RFFL-206ENST00000447669 YBEYP58557 167 aaPredicted RBP25.39■■□□□ 1.65
RFFL-206ENST00000447669 MAXP61244 160 aa25.39■■□□□ 1.65
RFFL-206ENST00000447669 C6orf118Q5T5N4 469 aa25.39■■□□□ 1.65
RFFL-206ENST00000447669 TRIM68Q6AZZ1 485 aa25.39■■□□□ 1.65
RFFL-206ENST00000447669 IL12RB2Q99665 862 aa25.39■■□□□ 1.65
RFFL-206ENST00000447669 MUC3BQ9H195 1237 aa25.39■■□□□ 1.65
RFFL-206ENST00000447669 DONSONQ9NYP3 566 aa25.39■■□□□ 1.65
RFFL-206ENST00000447669 NUP210Q8TEM1 1887 aaPredicted RBP25.38■■□□□ 1.65
RFFL-206ENST00000447669 E7EVH7 732 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 MAP2K7O14733 419 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 GJB3O75712 270 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 PMS2P54278 862 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 USP4Q13107 963 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 MFN1Q8IWA4 741 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 CPXM2Q8N436 756 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 SPATA22Q8NHS9 363 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 C9orf72Q96LT7 481 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 EPB41L4BQ9H329 900 aa25.38■■□□□ 1.65
RFFL-206ENST00000447669 SNAP91O60641 907 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 FAM193AP78312 1265 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 IFI35P80217 286 aaPredicted RBP25.37■■□□□ 1.65
RFFL-206ENST00000447669 SEMA5AQ13591 1074 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 CDH18Q13634 790 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 PARP6Q2NL67 630 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 FYB2Q5VWT5 728 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 TIGD7Q6NT04 549 aaPredicted RBP25.37■■□□□ 1.65
RFFL-206ENST00000447669 OR2W6PQ8NHA6 318 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 LRCH3Q96II8 777 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 ZFYVE19Q96K21 471 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 MAGEH1Q9H213 219 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 LRRC4CQ9HCJ2 640 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 ATP13A1Q9HD20 1204 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 SAYSD1Q9NPB0 183 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 CBX4O00257 560 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 CHADO15335 359 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 MTSS1O43312 755 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 LTBRP36941 435 aa25.37■■□□□ 1.65
RFFL-206ENST00000447669 CSKP41240 450 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms