RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 OSGEPQ9NPF4 335 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 NDFIP2Q9NV92 336 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 HPCAL4Q9UM19 191 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 CYP8B1Q9UNU6 501 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 HS3ST2Q9Y278 367 aa17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 RIF1Q5UIP0 2472 aaKnown RBP17.87■□□□□ 0.45
SMARCAL1-209ENST00000444508 TMEM110-MUSTN1A8MSY1 372 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 WASH4PA8MWX3 477 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 ATP9BO43861 1147 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 LCA5LO95447 670 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 TCF4P15884 667 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 FECHP22830 423 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 ARL4AP40617 200 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 DLG2Q15700 870 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 PLK5Q496M5 336 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 C9orf64Q5T6V5 341 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 ZNF776Q68DI1 518 aaPredicted RBP17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 SLC36A4Q6YBV0 504 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 RFX8Q6ZV50 586 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 ZNF354CQ86Y25 554 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 SH2D3CQ8N5H7 860 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 FAM160A2Q8N612 972 aaPredicted RBP17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 RUBCNQ92622 972 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 ARHGEF2Q92974 986 aaKnown RBP17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 ZC3H10Q96K80 434 aaKnown RBP17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 PLXND1Q9Y4D7 1925 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 GPR179Q6PRD1 2367 aa17.86■□□□□ 0.45
SMARCAL1-209ENST00000444508 SOWAHDA6NJG2 315 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 H3BRJ5 948 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 DNTTP04053 509 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 RARAP10276 462 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 SRCP12931 536 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 GOT1P17174 413 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 GLDCP23378 1020 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 MAN1A1P33908 653 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 ACVRL1P37023 503 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 ARHGAP25P42331 645 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 HCAR3P49019 387 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 CLCN6P51797 869 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 GEMIN4P57678 1058 aaKnown RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 YBEYP58557 167 aaPredicted RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 SLC25A11Q02978 314 aaKnown RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 ZBTB16Q05516 673 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 SLC20A2Q08357 652 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 ELAVL3Q14576 367 aaKnown RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 MESDQ14696 234 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 DPYSL2Q16555 572 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 TTC31Q49AM3 519 aaPredicted RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 LINGO4Q6UY18 593 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 UMODL1-AS1Q8N2C9 162 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 FRS2Q8WU20 508 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 BAG1Q99933 345 aaPredicted RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 ACE2Q9BYF1 805 aaPredicted RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 DUSP15Q9H1R2 295 aaPredicted RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 RSPH9Q9H1X1 276 aaPredicted RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 ITM2CQ9NQX7 267 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 PCDHA13Q9Y5I0 950 aa17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 EPN1Q9Y6I3 576 aaPredicted RBP17.85■□□□□ 0.45
SMARCAL1-209ENST00000444508 MTA2O94776 668 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 NDUFA10O95299 355 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 MT-CO1P00395 513 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 RETP07949 1114 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 BCKDHBP21953 392 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 OXTRP30559 389 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 GJC1P36383 396 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 RPS14P62263 151 aaKnown RBP17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 SFSWAPQ12872 951 aaKnown RBP17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 KRT81Q14533 505 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 PARP15Q460N3 678 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 PMS2CLQ68D20 193 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 LPCAT2Q7L5N7 544 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 DSG4Q86SJ6 1040 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 FRMD1Q8N878 549 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 PTPRN2Q92932 1015 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 LOXL4Q96JB6 756 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 CCDC114Q96M63 670 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 CWC15Q9P013 229 aaKnown RBP17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 USP36Q9P275 1121 aaKnown RBP17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 MBD1Q9UIS9 605 aaPredicted RBP17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 SCML1Q9UN30 329 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 FARP1Q9Y4F1 1045 aaPredicted RBP17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 OTOGLQ3ZCN5 2332 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 CHD5Q8TDI0 1954 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 NYNRINQ9P2P1 1898 aaKnown RBP17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 USP34Q70CQ2 3546 aa17.84■□□□□ 0.45
SMARCAL1-209ENST00000444508 EP300Q09472 2414 aaPredicted RBP17.83■□□□□ 0.45
SMARCAL1-209ENST00000444508 FRYLO94915 3013 aa17.83■□□□□ 0.45
SMARCAL1-209ENST00000444508 IGHV1OR15-9A0A0B4J2B8 117 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 CXorf51AA0A1B0GTR3 108 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 ZSCAN5CA6NGD5 496 aaPredicted RBP17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 RASA4BC9J798 803 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 RASA4O43374 803 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 BNIP3LO60238 219 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 NDUFS2O75306 463 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 ZMPSTE24O75844 475 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 KRT7P08729 469 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 VAV1P15498 845 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 ERCC2P18074 760 aa17.83■□□□□ 0.44
SMARCAL1-209ENST00000444508 CD6P30203 668 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms