RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 L1CAMP32004 1257 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 NAGLUP54802 743 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 PSME3P61289 254 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 CCDC142Q17RM4 750 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 ANKRD26P1Q6NSI1 321 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 NIPAL1Q6NVV3 410 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 ZFP1Q6P2D0 407 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 BBS12Q6ZW61 710 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 CHSY3Q70JA7 882 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 LDHDQ86WU2 507 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 DEPDC4Q8N2C3 294 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 ARFGAP1Q8N6T3 406 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 UBA3Q8TBC4 463 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 CANT1Q8WVQ1 401 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 TFAP2BQ92481 460 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 SGCDQ92629 289 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 SLC45A3Q96JT2 553 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 OMDQ99983 421 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 APOL2Q9BQE5 337 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 BEGAINQ9BUH8 593 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 CDH19Q9H159 772 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 PTPRHQ9HD43 1115 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 KCNH7Q9NS40 1196 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 SMOXQ9NWM0 555 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 NCKIPSDQ9NZQ3 722 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 COX16Q9P0S2 106 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 COPG2Q9UBF2 871 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 ZMAT5Q9UDW3 170 aaKnown RBP7.67□□□□□ -1.18
HDAC9-214ENST00000441542 CNOT6Q9ULM6 557 aaKnown RBP7.67□□□□□ -1.18
HDAC9-214ENST00000441542 C10orf71Q711Q0 1435 aa7.67□□□□□ -1.18
HDAC9-214ENST00000441542 ATP6AP2A0A1C7CYW4 349 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 DDTLA6NHG4 134 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 GLRA3O75311 464 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 ATP6AP2O75787 350 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CHEK2O96017 543 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 IDO1P14902 403 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 TSPAN8P19075 237 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CCNA2P20248 432 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 OPRL1P41146 370 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 BAG6P46379 1132 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 RGS7P49802 495 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 SEPHS1P49903 392 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CDH8P55286 799 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 TFAMQ00059 246 aaKnown RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 GCNT1Q02742 428 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 TRPC3Q13507 836 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 PIGHQ14442 188 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 PIGGQ5H8A4 983 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 FAM102AQ5T9C2 384 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 DRICH1Q6PGQ1 229 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 BORAQ6PGQ7 559 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 ARCQ7LC44 396 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 PIGZQ86VD9 579 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 MAGEE2Q8TD90 523 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CPB2Q96IY4 423 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 EFCAB1Q9HAE3 211 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 PLAC1Q9HBJ0 212 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 QPCTLQ9NXS2 382 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 KLQ9UEF7 1012 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 SLC8A2Q9UPR5 921 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 SORCS3Q9UPU3 1222 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 ASTN2O75129 1339 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 NOTOA8MTQ0 251 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 TK2O00142 265 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 PFDN6O15212 129 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 PHGDHO43175 533 aaKnown RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 XYLBO75191 536 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 GUCY1B2O75343 617 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 VNN1O95497 513 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CST3P01034 146 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CALB1P05937 261 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 KRT7P08729 469 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 ITGB5P18084 799 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 MATN1P21941 496 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 PRDX6P30041 224 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CASP2P42575 452 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 GABPAQ06546 454 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 C1QBPQ07021 282 aaKnown RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 SPP2Q13103 211 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 ZBTB17Q13105 803 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 KCNJ11Q14654 390 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 MAPRE1Q15691 268 aaKnown RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 INAQ16352 499 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 AGKQ53H12 422 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 MOXD1Q6UVY6 613 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 TMC5Q6UXY8 1006 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 PHF13Q86YI8 300 aaPredicted RBP7.66□□□□□ -1.18
HDAC9-214ENST00000441542 RNF135Q8IUD6 432 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 TMEM161BQ8NDZ6 487 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 ACER1Q8TDN7 264 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CRYGNQ8WXF5 182 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 TANKQ92844 425 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 TMEM143Q96AN5 459 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 RNF38Q9H0F5 515 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CCDC68Q9H2F9 335 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CYP4F12Q9HCS2 524 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 NUDT5Q9UKK9 219 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 GPSM3Q9Y4H4 160 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CDY2AQ9Y6F7 541 aa7.66□□□□□ -1.18
HDAC9-214ENST00000441542 CDY1Q9Y6F8 540 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms