RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 NXPH1P58417 271 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 RNASE9P60153 205 aaKnown RBP11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 KRT83P78385 493 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 CNTN1Q12860 1018 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 OVGP1Q12889 678 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 CAMK2BQ13554 666 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 SHBQ15464 509 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 MAN2A1Q16706 1144 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 BRMS1LQ5PSV4 323 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 ACBD5Q5T8D3 534 aaPredicted RBP11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 Q6ZVU0 165 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 C14orf80Q86SX3 495 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 SLC47A2Q86VL8 602 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 TMPRSS12Q86WS5 348 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 TRIM69Q86WT6 500 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 MARCH9Q86YJ5 346 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 FAM114A1Q8IWE2 563 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 FAM71AQ8IYT1 594 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 SH2D3CQ8N5H7 860 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 TMEM35BQ8NCS4 154 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 OR52K2Q8NGK3 314 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 PIP4K2CQ8TBX8 421 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 NT5C3BQ969T7 300 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 CNDP2Q96KP4 475 aaKnown RBP11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 NPY6RQ99463 290 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 C2orf49Q9BVC5 232 aaPredicted RBP11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 MUC3BQ9H195 1237 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 PDCL3Q9H2J4 239 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 PIGVQ9NUD9 493 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 ARHGAP20Q9P2F6 1191 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 AJAP1Q9UKB5 411 aaPredicted RBP11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 PAXBP1Q9Y5B6 917 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 LOC400499M0QZD8 3231 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 URB1O60287 2271 aaKnown RBP11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 PTPRBP23467 1997 aa11.94□□□□□ -0.5
UBE2D4-204ENST00000440899 TMEM131Q92545 1883 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 FAM149AA5PLN7 773 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 CNTN5O94779 1100 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 ADCY5O95622 1261 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 PRKCSHP14314 528 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 EPHA8P29322 1005 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 MAT2AP31153 395 aaKnown RBP11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 SCNN1AP37088 669 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 GGCXP38435 758 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 GABRB2P47870 512 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 CYP4F3Q08477 520 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 CCDC15Q0P6D6 951 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 STAT4Q14765 748 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 SETMARQ53H47 684 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 AGBL4Q5VU57 503 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 C19orf48Q6RUI8 117 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 LRRC31Q6UY01 552 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 SETD3Q86TU7 594 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 EID2Q8N6I1 236 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 PGAP3Q96FM1 320 aaPredicted RBP11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 CCDC114Q96M63 670 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 TKTL2Q9H0I9 626 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 NDST4Q9H3R1 872 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 PREBQ9HCU5 417 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 PLCB1Q9NQ66 1216 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 ARHGEF38Q9NXL2 777 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 STAP1Q9ULZ2 295 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 HS3ST2Q9Y278 367 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 RAXQ9Y2V3 346 aa11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 FASNP49327 2511 aaKnown RBP11.93□□□□□ -0.5
UBE2D4-204ENST00000440899 BAHCC1Q9P281 2608 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 PLXNA2O75051 1894 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 DRGXA6NNA5 263 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 PRAMEF26H0Y7S4 382 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 BNIP3LO60238 219 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 RNGTTO60942 597 aaKnown RBP11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 RFPL3O75679 317 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 MT-CO1P00395 513 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 RHOCP08134 193 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 PNMA6AP0CW24 399 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 SRCP12931 536 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 HOXB3P14651 431 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 TFE3P19532 575 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 CDH5P33151 784 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 HNF1BP35680 557 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 SULT1E1P49888 294 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 DEUP1Q05D60 604 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 BNIP3Q12983 259 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 DRAP1Q14919 205 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 SLC25A52Q3SY17 297 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 POM121L1PQ3SYA9 428 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 VWA3BQ502W6 1294 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 OTUD1Q5VV17 481 aaPredicted RBP11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 DPY19L2P1Q6NXN4 242 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 SPATS2Q86XZ4 545 aaKnown RBP11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 ATP11CQ8NB49 1132 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 TMIEQ8NEW7 156 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 C18orf8Q96DM3 657 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 C1orf74Q96LT6 269 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 TUBGCP2Q9BSJ2 902 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 SCUBE2Q9NQ36 999 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 VPS51Q9UID3 782 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 IGSF10Q6WRI0 2623 aa11.92□□□□□ -0.5
UBE2D4-204ENST00000440899 SMG1Q96Q15 3661 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms