RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 GTPBP10A4D1E9 387 aaKnown RBP18.66■□□□□ 0.58
GTF3A-204ENST00000438571 ENC1O14682 589 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 MT-CO1P00395 513 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 ITGAVP06756 1048 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 SLC2A3P11169 496 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 TAS2R38P59533 333 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 SULT2A1Q06520 285 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 SFSWAPQ12872 951 aaKnown RBP18.66■□□□□ 0.58
GTF3A-204ENST00000438571 DLG2Q15700 870 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 NAPEPLDQ6IQ20 393 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 KANSL1Q7Z3B3 1105 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 ZNF683Q8IZ20 524 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 GALNT15Q8N3T1 639 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 SH2D3CQ8N5H7 860 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 HNRNPLLQ8WVV9 542 aaKnown RBP18.66■□□□□ 0.58
GTF3A-204ENST00000438571 OR8D1Q8WZ84 308 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 FAM81BQ96LP2 452 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 NPY6RQ99463 290 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 VPS28Q9UK41 221 aa18.66■□□□□ 0.58
GTF3A-204ENST00000438571 COL27A1Q8IZC6 1860 aaPredicted RBP18.66■□□□□ 0.58
GTF3A-204ENST00000438571 SMG1Q96Q15 3661 aaKnown RBP18.66■□□□□ 0.58
GTF3A-204ENST00000438571 K7ERQ8 282 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 TLR4O00206 839 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 DFNA5O60443 496 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 SRCP12931 536 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 NOS2P35228 1153 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 ACADVLP49748 655 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 SULT1E1P49888 294 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 PTK2Q05397 1052 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 INAVAQ3KP66 663 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 C5orf22Q49AR2 442 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 C2CD6Q53TS8 623 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 MIIPQ5JXC2 388 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 ARTNQ5T4W7 220 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 TRNP1Q6NT89 227 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 ZNF397Q8NF99 534 aaPredicted RBP18.65■□□□□ 0.58
GTF3A-204ENST00000438571 ARRDC3Q96B67 414 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 CRELD1Q96HD1 420 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 MYOCQ99972 504 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 TKTL2Q9H0I9 626 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 ARHGEF38Q9NXL2 777 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 PPM1HQ9ULR3 514 aa18.65■□□□□ 0.58
GTF3A-204ENST00000438571 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.64■□□□□ 0.57
GTF3A-204ENST00000438571 SDC3O75056 442 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 LDOC1O95751 146 aaPredicted RBP18.64■□□□□ 0.57
GTF3A-204ENST00000438571 GLDCP23378 1020 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 VASPP50552 380 aaPredicted RBP18.64■□□□□ 0.57
GTF3A-204ENST00000438571 RNASE9P60153 205 aaKnown RBP18.64■□□□□ 0.57
GTF3A-204ENST00000438571 ZNF177Q13360 481 aaPredicted RBP18.64■□□□□ 0.57
GTF3A-204ENST00000438571 MAN2A1Q16706 1144 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 PDZD3Q86UT5 571 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 KLK6Q92876 244 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 TBCBQ99426 244 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 SYNCQ9H7C4 482 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 VPS51Q9UID3 782 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 TBC1D30Q9Y2I9 924 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 FHOD1Q9Y613 1164 aa18.64■□□□□ 0.57
GTF3A-204ENST00000438571 ANKRD36A6QL64 1941 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 A0A0D9SEW6 157 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 C1QTNF3-AMACRE9PGA6 284 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 MCF2LO15068 1137 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 SLC7A4O43246 635 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 SMAD6O43541 496 aaKnown RBP18.63■□□□□ 0.57
GTF3A-204ENST00000438571 CLDN11O75508 207 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 RHOCP08134 193 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 RRM1P23921 792 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 KRT9P35527 623 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 CDH4P55283 916 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 UBE2HP62256 183 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 KCNMA1Q12791 1236 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 DPCR1Q3MIW9 517 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 PIP5KL1Q5T9C9 394 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 SFMBT2Q5VUG0 894 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 TAF3Q5VWG9 929 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 LINGO4Q6UY18 593 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 TFAP2DQ7Z6R9 452 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 PRPF39Q86UA1 669 aaKnown RBP18.63■□□□□ 0.57
GTF3A-204ENST00000438571 TRIM69Q86WT6 500 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 FAM71AQ8IYT1 594 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 MFSD2AQ8NA29 543 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 CHST14Q8NCH0 376 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 SKA1Q96BD8 255 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 NOX5Q96PH1 765 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 MUC3BQ9H195 1237 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 FZD3Q9NPG1 666 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.63■□□□□ 0.57
GTF3A-204ENST00000438571 MPP6Q9NZW5 540 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 DKK4Q9UBT3 224 aa18.63■□□□□ 0.57
GTF3A-204ENST00000438571 RFPL3O75679 317 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 PRLRP16471 622 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 FLT3P36888 993 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 CXCR3P49682 368 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 OXCT1P55809 520 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 RAPGEF1Q13905 1077 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 DRAP1Q14919 205 aaPredicted RBP18.62■□□□□ 0.57
GTF3A-204ENST00000438571 RAB6CQ53S08 254 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 DSG4Q86SJ6 1040 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 OR7D4Q8NG98 312 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 OR2A12Q8NGT7 310 aa18.62■□□□□ 0.57
GTF3A-204ENST00000438571 TSC1Q92574 1164 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms