RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 CRYGNQ8WXF5 182 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 CPT1BQ92523 772 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 RNF125Q96EQ8 232 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 TMEM168Q9H0V1 697 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 LMAN2LQ9H0V9 348 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 PSTPIP2Q9H939 334 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 KCNK12Q9HB15 430 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 SPON1Q9HCB6 807 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 TBX20Q9UMR3 447 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 SHOC2Q9UQ13 582 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 CDYLQ9Y232 598 aa6.73□□□□□ -1.33
SPEN-202ENST00000438066 TMEM232C9JQI7 657 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 MEIS2O14770 477 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 MSTNO14793 375 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 GCFC2P16383 781 aaKnown RBP6.72□□□□□ -1.33
SPEN-202ENST00000438066 ZNF18P17022 549 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 ABCD3P28288 659 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 CASP1P29466 404 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 SERPINA4P29622 427 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 STAT6P42226 847 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 KCNC1P48547 511 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 CCR9P51686 369 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 TPM4P67936 248 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.72□□□□□ -1.33
SPEN-202ENST00000438066 GALNT2Q10471 571 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 PDCLQ13371 301 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 NOMO2Q5JPE7 1267 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 MED25Q71SY5 747 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 B4GALNT4Q76KP1 1039 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 ENOSF1Q7L5Y1 443 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 KRT77Q7Z794 578 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 LSMEM1Q8N8F7 131 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 FNIP1Q8TF40 1166 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 TFAP2CQ92754 450 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 PPP2R3CQ969Q6 453 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 MBOAT7Q96N66 472 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 ZNF830Q96NB3 372 aaPredicted RBP6.72□□□□□ -1.33
SPEN-202ENST00000438066 MMTAG2Q9BU76 263 aaKnown RBP6.72□□□□□ -1.33
SPEN-202ENST00000438066 LSM14BQ9BX40 385 aaKnown RBP6.72□□□□□ -1.33
SPEN-202ENST00000438066 XPO4Q9C0E2 1151 aaKnown RBP6.72□□□□□ -1.33
SPEN-202ENST00000438066 CUEDC2Q9H467 287 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 MAGEF1Q9HAY2 307 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 BARX1Q9HBU1 254 aaPredicted RBP6.72□□□□□ -1.33
SPEN-202ENST00000438066 FAM30AQ9NZY2 134 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 CNTN6Q9UQ52 1028 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 MRPS17Q9Y2R5 130 aaKnown RBP6.72□□□□□ -1.33
SPEN-202ENST00000438066 RLFQ13129 1914 aa6.72□□□□□ -1.33
SPEN-202ENST00000438066 ZNF541Q9H0D2 1346 aa6.71□□□□□ -1.33
SPEN-202ENST00000438066 SYNDIG1LA6NDD5 238 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 OR2W5A6NFC9 320 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 ASNSP08243 561 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 CNPP09543 421 aaKnown RBP6.71□□□□□ -1.34
SPEN-202ENST00000438066 UBA7P41226 1012 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 NPTX2P47972 431 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 GMPSP49915 693 aaPredicted RBP6.71□□□□□ -1.34
SPEN-202ENST00000438066 STAT2P52630 851 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 ZNF134P52741 427 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 SATB1Q01826 763 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 TNFAIP1Q13829 316 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 SMAD1Q15797 465 aaKnown RBP6.71□□□□□ -1.34
SPEN-202ENST00000438066 CALCRLQ16602 461 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 PTCHD3Q3KNS1 767 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 TRIM60Q495X7 471 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 GALNTL6Q49A17 601 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 MCTP2Q6DN12 878 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 MOXD1Q6UVY6 613 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 TMCO3Q6UWJ1 677 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 CCDC186Q7Z3E2 898 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 R3HCC1LQ7Z5L2 792 aaKnown RBP6.71□□□□□ -1.34
SPEN-202ENST00000438066 ABI1Q8IZP0 508 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 CFAP52Q8N1V2 620 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 TMEM151AQ8N4L1 468 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 PSD4Q8NDX1 1056 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 WDR60Q8WVS4 1066 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 RABGGTAQ92696 567 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 STAMQ92783 540 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 DIRC2Q96SL1 478 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 MCOLN1Q9GZU1 580 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 SH2D4AQ9H788 454 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 VCPKMTQ9H867 229 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 HAUS2Q9NVX0 235 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 NSMCE4AQ9NXX6 385 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 ETAA1Q9NY74 926 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 IFNKQ9P0W0 207 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.71□□□□□ -1.34
SPEN-202ENST00000438066 NR2E1Q9Y466 385 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 POLR2AP24928 1970 aaKnown RBP6.71□□□□□ -1.34
SPEN-202ENST00000438066 WDR90Q96KV7 1748 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 SYNRGQ9UMZ2 1314 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 PTPRFP10586 1907 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 LOC285556D6RIA3 1793 aa6.71□□□□□ -1.34
SPEN-202ENST00000438066 OTOFQ9HC10 1997 aa6.7□□□□□ -1.34
SPEN-202ENST00000438066 CYP3A7-CYP3A51PA0A087WV96 503 aa6.7□□□□□ -1.34
SPEN-202ENST00000438066 RPP40O75818 363 aaKnown RBP6.7□□□□□ -1.34
SPEN-202ENST00000438066 RPN1P04843 607 aaKnown RBP6.7□□□□□ -1.34
SPEN-202ENST00000438066 ATXN1LP0C7T5 689 aaKnown RBP6.7□□□□□ -1.34
SPEN-202ENST00000438066 MYCLP12524 364 aaPredicted RBP6.7□□□□□ -1.34
SPEN-202ENST00000438066 CYP3A7P24462 503 aa6.7□□□□□ -1.34
SPEN-202ENST00000438066 NTSR1P30989 418 aa6.7□□□□□ -1.34
SPEN-202ENST00000438066 MAGEA10P43363 369 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms