RNA–Protein interactions for RNA: ENST00000425060.1

IGHV3-47-201, Transcript of immunoglobulin heavy variable 3-47 (pseudogene), humanhuman

BASIC

Gene IGHV3-47, Length 335 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-47-201ENST00000425060 PCED1AQ9H1Q7 454 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 TMEM248Q9NWD8 314 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 CNOT8Q9UFF9 292 aaKnown RBP18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 PI4KAP42356 2102 aa18.35■□□□□ 0.53
IGHV3-47-201ENST00000425060 C10orf142B7Z368 130 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 MID1O15344 667 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 RNASEH1O60930 286 aaKnown RBP18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 TPM3P06753 285 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 GLDCP23378 1020 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 MAOBP27338 520 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 SLC8A1P32418 973 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 MAPKAPK2P49137 400 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 AIF1P55008 147 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 GNA12Q03113 381 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 SEMA3BQ13214 749 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 ELAVL3Q14576 367 aaKnown RBP18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 DUOXA1Q1HG43 343 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 TTC31Q49AM3 519 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 TDRD12Q587J7 1177 aaKnown RBP18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 STPG1Q5TH74 334 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 SCYL2Q6P3W7 929 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 MMAAQ8IVH4 418 aaKnown RBP18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 RNF214Q8ND24 703 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 CEP76Q8TAP6 659 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 TBC1D31Q96DN5 1066 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 ACE2Q9BYF1 805 aaPredicted RBP18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 CAPN10Q9HC96 672 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 ARHGAP20Q9P2F6 1191 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 SERGEFQ9UGK8 458 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 NENFQ9UMX5 172 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 LAMA1P25391 3075 aa18.34■□□□□ 0.53
IGHV3-47-201ENST00000425060 CHD5Q8TDI0 1954 aa18.33■□□□□ 0.53
IGHV3-47-201ENST00000425060 A0A087X0T9 212 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 K7ERQ8 282 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 CDX4O14627 284 aaPredicted RBP18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 CBFA2T2O43439 604 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 SMAD6O43541 496 aaKnown RBP18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 CD160O95971 181 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 FAM228BP0C875 321 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 MYBL1P10243 752 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 PSMA2P25787 234 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 WDR45BQ5MNZ6 344 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 SYCP2LQ5T4T6 812 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 DCAF12L1Q5VU92 463 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 RWDD4Q6NW29 188 aaKnown RBP18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 DRC7Q8IY82 874 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 C1orf216Q8TAB5 229 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 FAM131CQ96AQ9 280 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 ZNF653Q96CK0 615 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 TRIM11Q96F44 468 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 EDEM2Q9BV94 578 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 BTBD1Q9H0C5 482 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 C6orf106Q9H6K1 298 aaPredicted RBP18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 SGK2Q9HBY8 427 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 FBXL12Q9NXK8 326 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 SLC6A14Q9UN76 642 aa18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 NYNRINQ9P2P1 1898 aaKnown RBP18.33■□□□□ 0.52
IGHV3-47-201ENST00000425060 CXorf51AA0A1B0GTR3 108 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 MCF2LO15068 1137 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 ZNF821O75541 412 aaPredicted RBP18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 SERPINF2P08697 491 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 C5AR1P21730 350 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 ACVRL1P37023 503 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 ARF5P84085 180 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 ACCSLQ4AC99 568 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 EFHC2Q5JST6 749 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 SPECC1LQ69YQ0 1117 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 Q6ZVU0 165 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 ERMP1Q7Z2K6 904 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 RABEPKQ7Z6M1 372 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 VSTM4Q8IW00 320 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 RGL4Q8IZJ4 473 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 AADATQ8N5Z0 425 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 ARHGEF2Q92974 986 aaKnown RBP18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 NEUROG2Q9H2A3 272 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 SARDHQ9UL12 918 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 PPM1HQ9ULR3 514 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 NCKAP1Q9Y2A7 1128 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 SCINQ9Y6U3 715 aa18.32■□□□□ 0.52
IGHV3-47-201ENST00000425060 CACNA1AO00555 2505 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 A0A1W2PP55 124 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 DCDC2BA2VCK2 349 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 WASH4PA8MWX3 477 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 ALOX15BO15296 676 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 SEMA4FO95754 770 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 ADH1BP00325 375 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 DRD3P35462 400 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 PSMD8P48556 350 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 CLCN6P51797 869 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 METAP1P53582 386 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 SLC20A2Q08357 652 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 SFSWAPQ12872 951 aaKnown RBP18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 LINGO4Q6UY18 593 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 CYP4V2Q6ZWL3 525 aaPredicted RBP18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 DGLUCYQ7Z3D6 616 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 VPS36Q86VN1 386 aa18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 RTL3Q8N8U3 475 aaKnown RBP18.31■□□□□ 0.52
IGHV3-47-201ENST00000425060 ATP11CQ8NB49 1132 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms