RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 MT-CO1P00395 513 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 C1SP09871 688 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 TFE3P19532 575 aaPredicted RBP25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 TARDBPQ13148 414 aaKnown RBP eCLIP25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 SLC45A4Q5BKX6 768 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 EFHC1Q5JVL4 640 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 HES3Q5TGS1 186 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 TRIM69Q86WT6 500 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 IRF2BP1Q8IU81 584 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 SH2D3CQ8N5H7 860 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 C1orf131Q8NDD1 294 aaKnown RBP25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 PIP4K2CQ8TBX8 421 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 APEX2Q9UBZ4 518 aa25.04■■□□□ 1.6
AC005540.1-201ENST00000413911 GCN1Q92616 2671 aaKnown RBP25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 CTSLP07711 333 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 OXCT1P55809 520 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 C5orf22Q49AR2 442 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 PTPN20Q4JDL3 420 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 OR6B2Q6IFH4 312 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 C11orf57Q6ZUT1 292 aaPredicted RBP25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 DCBLD2Q96PD2 775 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 PSMB7Q99436 277 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 SIX2Q9NPC8 291 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 SLC25A13Q9UJS0 675 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 VPS28Q9UK41 221 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 TBC1D30Q9Y2I9 924 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 SNX10Q9Y5X0 201 aa25.03■■□□□ 1.6
AC005540.1-201ENST00000413911 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 K7ERQ8 282 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 TLX3O43711 291 aaPredicted RBP25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 BNIP3LO60238 219 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 SDC3O75056 442 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 PNMA6AP0CW24 399 aaPredicted RBP25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 PON1P27169 355 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 ITPKBP27987 946 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 ZNF177Q13360 481 aaPredicted RBP25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 ALFQ53S48 1182 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 FAM46CQ5VWP2 391 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 DSG4Q86SJ6 1040 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 IQCHQ86VS3 1027 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 CREBRFQ8IUR6 639 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 SIK2Q9H0K1 926 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 PLCB1Q9NQ66 1216 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 PIGVQ9NUD9 493 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 DMTF1Q9Y222 760 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 MYLKQ15746 1914 aa25.02■■□□□ 1.6
AC005540.1-201ENST00000413911 M0QYT0 321 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 SNAP91O60641 907 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 DAB1O75553 588 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 ADCY5O95622 1261 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 SRCP12931 536 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 SLC6A3Q01959 620 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 ARTNQ5T4W7 220 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 PIP5KL1Q5T9C9 394 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 GBP6Q6ZN66 633 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 SLC26A9Q7LBE3 791 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 ZNF683Q8IZ20 524 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 OXR1Q8N573 874 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 RWDD2AQ9UIY3 292 aa25.01■■□□□ 1.59
AC005540.1-201ENST00000413911 TRIM38O00635 465 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 ALOX15BO15296 676 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 CLDN11O75508 207 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 CDK4P11802 303 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 CLCN1P35523 988 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 HNF1BP35680 557 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 STAT4Q14765 748 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 EXOC3L4Q17RC7 722 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 PROX2Q3B8N5 592 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 SLC47A2Q86VL8 602 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 SLC25A45Q8N413 288 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 TMEM145Q8NBT3 493 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 KLK6Q92876 244 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 ARRDC3Q96B67 414 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 NXPE2Q96DL1 559 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 FAM81BQ96LP2 452 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 NPY6RQ99463 290 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 MYOCQ99972 504 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 TMPRSS4Q9NRS4 437 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 HS3ST2Q9Y278 367 aa25■■□□□ 1.59
AC005540.1-201ENST00000413911 C1QTNF3-AMACRE9PGA6 284 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 PRAMEF26H0Y7S4 382 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 FOXN3O00409 490 aaPredicted RBP24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 SMAD6O43541 496 aaKnown RBP24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 RNGTTO60942 597 aaKnown RBP24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 FGFR1OPO95684 399 aaKnown RBP24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 PRLRP16471 622 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 ZNF18P17022 549 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 CKMT2P17540 419 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 NOS2P35228 1153 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 NUDT1P36639 197 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 CDH4P55283 916 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 SEMG2Q02383 582 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 OVGP1Q12889 678 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 C6orf118Q5T5N4 469 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 ZNF397Q8NF99 534 aaPredicted RBP24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 OR2A12Q8NGT7 310 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 PPP1R9BQ96SB3 815 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 MUC3BQ9H195 1237 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 ARHGEF38Q9NXL2 777 aa24.99■■□□□ 1.59
AC005540.1-201ENST00000413911 VPS51Q9UID3 782 aa24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms