RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 AKR1B10O60218 316 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 PRPSAP2O60256 369 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 FOXD2O60548 495 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 IGLV3-19P01714 112 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 C7P10643 843 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 MIPP30301 263 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 LMNB2Q03252 620 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 TBX2Q13207 712 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 MAPK8IP2Q13387 824 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 SF3A2Q15428 464 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 SLC18A3Q16572 532 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 TTC31Q49AM3 519 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 IL31Q6EBC2 164 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 C12orf50Q8NA57 414 aaPredicted RBP18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 GANCQ8TET4 914 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 NUP85Q9BW27 656 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 GPR174Q9BXC1 333 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 DHX35Q9H5Z1 703 aaKnown RBP18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 HS3ST2Q9Y278 367 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 NCKAP1Q9Y2A7 1128 aa18.37■□□□□ 0.53
PDLIM2-206ENST00000409141 DOCK4Q8N1I0 1966 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 RALGAPA1Q6GYQ0 2036 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 PLXND1Q9Y4D7 1925 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 BNIP3LO60238 219 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 LRCH4O75427 683 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 SRCP12931 536 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 GLDCP23378 1020 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 ITPKAP23677 461 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 ETFBP38117 255 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 SFSWAPQ12872 951 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 SEMA3BQ13214 749 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 ELAVL3Q14576 367 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 ACAP1Q15027 740 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 CST6Q15828 149 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 ASTE1Q2TB18 679 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 RETSATQ6NUM9 610 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 LINGO4Q6UY18 593 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 GAS2L3Q86XJ1 694 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 SYT12Q8IV01 421 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 SLC41A1Q8IVJ1 513 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 FOXJ1Q92949 421 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 ARHGEF26Q96DR7 871 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 ZNF419Q96HQ0 510 aaPredicted RBP18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 CCDC42Q96M95 316 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 HSPA12BQ96MM6 686 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 PEBP4Q96S96 227 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 CHP1Q99653 195 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 MAGEH1Q9H213 219 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 PABPC3Q9H361 631 aaKnown RBP18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 NENFQ9UMX5 172 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 SCML1Q9UN30 329 aa18.36■□□□□ 0.53
PDLIM2-206ENST00000409141 PRR5-ARHGAP8B1AHC4 643 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 K7ERQ8 282 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 RAMP2O60895 175 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 ZMPSTE24O75844 475 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 SLC8A1P32418 973 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 ACVRL1P37023 503 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 DPP6P42658 865 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 ARHGAP8P85298 464 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 SLC20A2Q08357 652 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 PIGHQ14442 188 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 CA9Q16790 459 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 SYCP2LQ5T4T6 812 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 Q6ZVU0 165 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 RTL3Q8N8U3 475 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 OR8D1Q8WZ84 308 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 ARHGEF2Q92974 986 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 BTBD6Q96KE9 485 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 SNRNP25Q9BV90 132 aaKnown RBP18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 BTBD1Q9H0C5 482 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 CATSPERBQ9H7T0 1116 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 NHEJ1Q9H9Q4 299 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 TMEM74BQ9NUR3 256 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 FBXL12Q9NXK8 326 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 IP6K2Q9UHH9 426 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 ANAPC7Q9UJX3 599 aa18.35■□□□□ 0.53
PDLIM2-206ENST00000409141 SPTBN4Q9H254 2564 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 EIF3CLB5ME19 914 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 MID1O15344 667 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 SMAD6O43541 496 aaKnown RBP18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 ADH1BP00325 375 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 IL1BP01584 269 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 ACSL1P33121 698 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 HTR7P34969 479 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 PCK1P35558 622 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 PSMD8P48556 350 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 CLCN6P51797 869 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 ZNF75DP51815 510 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 TPI1P60174 286 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 POLD3Q15054 466 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 AASDHQ4L235 1098 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 WDR45BQ5MNZ6 344 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 DAB2IPQ5VWQ8 1189 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 TCEAL6Q6IPX3 200 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 USP30Q70CQ3 517 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 DSG4Q86SJ6 1040 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 RGL4Q8IZJ4 473 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 CADM4Q8NFZ8 388 aa18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 CTNNBL1Q8WYA6 563 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-206ENST00000409141 TCEAL3Q969E4 200 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms