RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 CYP4F3Q08477 520 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 SHBQ15464 509 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 MAN2A1Q16706 1144 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 BRMS1LQ5PSV4 323 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 SH2D3CQ8N5H7 860 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 OR52K2Q8NGK3 314 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 CCDC114Q96M63 670 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 SIX2Q9NPC8 291 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 PPM1HQ9ULR3 514 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 TBC1D30Q9Y2I9 924 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 PAXBP1Q9Y5B6 917 aa27.12■■□□□ 1.93
NPHP3-202ENST00000383282 E9PAM4 449 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 FOXN3O00409 490 aaPredicted RBP27.11■■□□□ 1.93
NPHP3-202ENST00000383282 RFPL3O75679 317 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 C1SP09871 688 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 CLCN1P35523 988 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 HNF1BP35680 557 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 CNTN1Q12860 1018 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 OVGP1Q12889 678 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 STAT4Q14765 748 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 POM121L1PQ3SYA9 428 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 C5orf22Q49AR2 442 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 AGBL4Q5VU57 503 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 C14orf80Q86SX3 495 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 IQCHQ86VS3 1027 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 TRIM69Q86WT6 500 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 EID2Q8N6I1 236 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 TMEM35BQ8NCS4 154 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 C2orf49Q9BVC5 232 aaPredicted RBP27.11■■□□□ 1.93
NPHP3-202ENST00000383282 TKTL2Q9H0I9 626 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 TMEM51Q9NW97 253 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP27.11■■□□□ 1.93
NPHP3-202ENST00000383282 ARHGAP20Q9P2F6 1191 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 AJAP1Q9UKB5 411 aaPredicted RBP27.11■■□□□ 1.93
NPHP3-202ENST00000383282 OR51B4Q9Y5P0 310 aa27.11■■□□□ 1.93
NPHP3-202ENST00000383282 ANKRD11Q6UB99 2663 aaPredicted RBP27.1■■□□□ 1.93
NPHP3-202ENST00000383282 RHOCP08134 193 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 HOXB3P14651 431 aaPredicted RBP27.1■■□□□ 1.93
NPHP3-202ENST00000383282 RXRGP48443 463 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 SULT1E1P49888 294 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 RNASE9P60153 205 aaKnown RBP27.1■■□□□ 1.93
NPHP3-202ENST00000383282 CCDC15Q0P6D6 951 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 CAMK2BQ13554 666 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 COL28A1Q2UY09 1125 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 SETMARQ53H47 684 aaPredicted RBP27.1■■□□□ 1.93
NPHP3-202ENST00000383282 NPY6RQ99463 290 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 PREBQ9HCU5 417 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 PLCB1Q9NQ66 1216 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 PIGVQ9NUD9 493 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 ARHGEF38Q9NXL2 777 aa27.1■■□□□ 1.93
NPHP3-202ENST00000383282 NYNRINQ9P2P1 1898 aaKnown RBP27.09■■□□□ 1.93
NPHP3-202ENST00000383282 F9P00740 461 aa27.09■■□□□ 1.93
NPHP3-202ENST00000383282 ACBD5Q5T8D3 534 aaPredicted RBP27.09■■□□□ 1.93
NPHP3-202ENST00000383282 LRRC31Q6UY01 552 aa27.09■■□□□ 1.93
NPHP3-202ENST00000383282 ATP11CQ8NB49 1132 aa27.09■■□□□ 1.93
NPHP3-202ENST00000383282 HS3ST2Q9Y278 367 aa27.09■■□□□ 1.93
NPHP3-202ENST00000383282 COL5A1P20908 1838 aaPredicted RBP27.09■■□□□ 1.93
NPHP3-202ENST00000383282 PRAMEF26H0Y7S4 382 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 CBX4O00257 560 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 CNTN5O94779 1100 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 ADCY5O95622 1261 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 PNMA6AP0CW24 399 aaPredicted RBP27.08■■□□□ 1.93
NPHP3-202ENST00000383282 SRCP12931 536 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 PRKCSHP14314 528 aaPredicted RBP27.08■■□□□ 1.93
NPHP3-202ENST00000383282 JUPP14923 745 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 CXCR3P49682 368 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 DEUP1Q05D60 604 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 BNIP3Q12983 259 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 DNAJC3Q13217 504 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 RAPGEF1Q13905 1077 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 SETD3Q86TU7 594 aaPredicted RBP27.08■■□□□ 1.93
NPHP3-202ENST00000383282 FAM71AQ8IYT1 594 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 HNRNPLLQ8WVV9 542 aaKnown RBP27.08■■□□□ 1.93
NPHP3-202ENST00000383282 PGAP3Q96FM1 320 aaPredicted RBP27.08■■□□□ 1.93
NPHP3-202ENST00000383282 NDST4Q9H3R1 872 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 SCUBE2Q9NQ36 999 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 DYRK4Q9NR20 520 aa27.08■■□□□ 1.93
NPHP3-202ENST00000383282 DSPP15924 2871 aaKnown RBP27.07■■□□□ 1.92
NPHP3-202ENST00000383282 GOLGA4Q13439 2230 aaKnown RBP27.07■■□□□ 1.92
NPHP3-202ENST00000383282 SCNN1AP37088 669 aa27.07■■□□□ 1.92
NPHP3-202ENST00000383282 COL9A2Q14055 689 aaPredicted RBP27.07■■□□□ 1.92
NPHP3-202ENST00000383282 VWA3BQ502W6 1294 aa27.07■■□□□ 1.92
NPHP3-202ENST00000383282 C6orf118Q5T5N4 469 aa27.07■■□□□ 1.92
NPHP3-202ENST00000383282 FAM102AQ5T9C2 384 aaPredicted RBP27.07■■□□□ 1.92
NPHP3-202ENST00000383282 OTUD1Q5VV17 481 aaPredicted RBP27.07■■□□□ 1.92
NPHP3-202ENST00000383282 PDZD3Q86UT5 571 aa27.07■■□□□ 1.92
NPHP3-202ENST00000383282 SPATS2Q86XZ4 545 aaKnown RBP27.07■■□□□ 1.92
NPHP3-202ENST00000383282 C18orf8Q96DM3 657 aa27.07■■□□□ 1.92
NPHP3-202ENST00000383282 ACACAQ13085 2346 aa27.07■■□□□ 1.92
NPHP3-202ENST00000383282 RNGTTO60942 597 aaKnown RBP27.06■■□□□ 1.92
NPHP3-202ENST00000383282 ACADVLP49748 655 aa27.06■■□□□ 1.92
NPHP3-202ENST00000383282 ALFQ53S48 1182 aa27.06■■□□□ 1.92
NPHP3-202ENST00000383282 ERICH1Q86X53 443 aa27.06■■□□□ 1.92
NPHP3-202ENST00000383282 DCAF4L2Q8NA75 395 aa27.06■■□□□ 1.92
NPHP3-202ENST00000383282 MSANTD4Q8NCY6 345 aa27.06■■□□□ 1.92
NPHP3-202ENST00000383282 PSMB7Q99436 277 aa27.06■■□□□ 1.92
NPHP3-202ENST00000383282 TUBGCP2Q9BSJ2 902 aa27.06■■□□□ 1.92
NPHP3-202ENST00000383282 VPS51Q9UID3 782 aa27.06■■□□□ 1.92
NPHP3-202ENST00000383282 TP53BP1Q12888 1972 aaPredicted RBP27.06■■□□□ 1.92
NPHP3-202ENST00000383282 LAMA5O15230 3695 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms