RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 GLOD4Q9HC38 313 aa18.42■□□□□ 0.54
CD40-202ENST00000372285 ZFP37Q9Y6Q3 630 aaPredicted RBP18.42■□□□□ 0.54
CD40-202ENST00000372285 GCAP28676 217 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 SLC7A9P82251 487 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 TNK2Q07912 1038 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 SERINC3Q13530 473 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 HNRNPDQ14103 355 aaKnown RBP18.41■□□□□ 0.54
CD40-202ENST00000372285 PRPSAP1Q14558 356 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 FAM109BQ6ICB4 259 aaPredicted RBP18.41■□□□□ 0.54
CD40-202ENST00000372285 CFAP52Q8N1V2 620 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 MICAL1Q8TDZ2 1067 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 FBF1Q8TES7 1133 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 SLC22A17Q8WUG5 538 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 ZNF419Q96HQ0 510 aaPredicted RBP18.41■□□□□ 0.54
CD40-202ENST00000372285 PRICKLE1Q96MT3 831 aaPredicted RBP18.41■□□□□ 0.54
CD40-202ENST00000372285 PPP1R2P1Q96PQ5 205 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 FCRL5Q96RD9 977 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 ASAH2Q9NR71 780 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 SMPD4Q9NXE4 827 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 ZC3H7BQ9UGR2 993 aaKnown RBP18.41■□□□□ 0.54
CD40-202ENST00000372285 SLC24A2Q9UI40 661 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 MYO7AQ13402 2215 aa18.41■□□□□ 0.54
CD40-202ENST00000372285 LAMA2P24043 3122 aaKnown RBP18.4■□□□□ 0.54
CD40-202ENST00000372285 SDR42E2A6NKP2 422 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 CCL16O15467 120 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 GREM1O60565 184 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 CLDN11O75508 207 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 CPP00450 1065 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 CA3P07451 260 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 IRS1P35568 1242 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 EPHA5P54756 1037 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 CYP4F8P98187 520 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 IL10RBQ08334 325 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 TERF2Q15554 542 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 TTC39BQ5VTQ0 682 aaPredicted RBP18.4■□□□□ 0.54
CD40-202ENST00000372285 PDE12Q6L8Q7 609 aaKnown RBP18.4■□□□□ 0.54
CD40-202ENST00000372285 CHST9Q7L1S5 443 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 ARFGAP2Q8N6H7 521 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 TGS1Q96RS0 853 aaKnown RBP18.4■□□□□ 0.54
CD40-202ENST00000372285 CORO1BQ9BR76 489 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 MAGEH1Q9H213 219 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 PLAC1Q9HBJ0 212 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 RBM22Q9NW64 420 aaKnown RBP eCLIP18.4■□□□□ 0.54
CD40-202ENST00000372285 CPQQ9Y646 472 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 J3KR12 359 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 CSPG5O95196 566 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 FGF19O95750 216 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 HLA-DQB2P05538 268 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 ATP5DP30049 168 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 HOXA9P31269 272 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 RENBPP51606 427 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 ERVK-21P61565 698 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 RPS24P62847 133 aaKnown RBP18.4■□□□□ 0.54
CD40-202ENST00000372285 SHHQ15465 462 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 SKIDA1Q1XH10 827 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 KLHL38Q2WGJ6 581 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 Q6ZNB5 142 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 OTOP3Q7RTS5 596 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 MPP5Q8N3R9 675 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 TEX26Q8N6G2 289 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 OXNAD1Q96HP4 312 aaPredicted RBP18.4■□□□□ 0.54
CD40-202ENST00000372285 GCNAQ96QF7 691 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 XPO6Q96QU8 1125 aaKnown RBP18.4■□□□□ 0.54
CD40-202ENST00000372285 ATXN3LQ9H3M9 355 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 LRRC40Q9H9A6 602 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 SP110Q9HB58 689 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 CASS4Q9NQ75 786 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 MAN1C1Q9NR34 630 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 PSD3Q9NYI0 1048 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 CTNNAL1Q9UBT7 734 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 AAR2Q9Y312 384 aaKnown RBP18.4■□□□□ 0.54
CD40-202ENST00000372285 PCDHA11Q9Y5I1 949 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 NOTCH4Q99466 2003 aa18.4■□□□□ 0.54
CD40-202ENST00000372285 ATG2AQ2TAZ0 1938 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 TRDMT1O14717 391 aaKnown RBP18.39■□□□□ 0.53
CD40-202ENST00000372285 CLASP2O75122 1294 aaKnown RBP18.39■□□□□ 0.53
CD40-202ENST00000372285 ANXA9O76027 345 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 MYL4P12829 197 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 GEMIN4P57678 1058 aaKnown RBP18.39■□□□□ 0.53
CD40-202ENST00000372285 PPP2R2AP63151 447 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 ZXDBP98169 803 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 SPARCL1Q14515 664 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 FAM217AQ8IXS0 508 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 MAB21L3Q8N8X9 362 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 ARHGEF2Q92974 986 aaKnown RBP18.39■□□□□ 0.53
CD40-202ENST00000372285 STAMBPL1Q96FJ0 436 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 CFAP36Q96G28 342 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 CYTH2Q99418 400 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 TTLL3Q9Y4R7 772 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 CHD9Q3L8U1 2897 aa18.39■□□□□ 0.53
CD40-202ENST00000372285 MIA3Q5JRA6 1907 aa18.38■□□□□ 0.53
CD40-202ENST00000372285 TRAV19A0A0A6YYK7 116 aa18.38■□□□□ 0.53
CD40-202ENST00000372285 A0A1B0GVM2 712 aa18.38■□□□□ 0.53
CD40-202ENST00000372285 A0A1W2PRU2 124 aa18.38■□□□□ 0.53
CD40-202ENST00000372285 TCRBV9S1A1TA0A576 114 aa18.38■□□□□ 0.53
CD40-202ENST00000372285 TCAF2A6NFQ2 919 aa18.38■□□□□ 0.53
CD40-202ENST00000372285 POC1B-GALNT4F8VUJ3 575 aa18.38■□□□□ 0.53
CD40-202ENST00000372285 GFRA2O00451 464 aa18.38■□□□□ 0.53
CD40-202ENST00000372285 PRAMEF11O60813 436 aa18.38■□□□□ 0.53
CD40-202ENST00000372285 HNRNPA1P09651 372 aaKnown RBP eCLIP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms