RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 TBC1D10AQ9BXI6 508 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 MTMR12Q9C0I1 747 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 SLITRK6Q9H5Y7 841 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 PALMDQ9NP74 551 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 YIPF1Q9Y548 306 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 NBPF19A0A087WUL8 3843 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 TMEM114B3SHH9 223 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 NR3C1P04150 777 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 RARGP13631 454 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 SERPINB3P29508 390 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 MAGEA1P43355 309 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 DRG2P55039 364 aaKnown RBP7.05□□□□□ -1.28
CSDE1-204ENST00000369530 NFX1Q12986 1120 aaKnown RBP7.05□□□□□ -1.28
CSDE1-204ENST00000369530 TCEAL1Q15170 157 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 ARHGAP44Q17R89 818 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 MSANTD2Q6P1R3 559 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 LVRNQ6Q4G3 990 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 PHLDB2Q86SQ0 1253 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 UNC93AQ86WB7 457 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 HS6ST3Q8IZP7 471 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 LEMD2Q8NC56 503 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 CCDC127Q96BQ5 260 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 MED30Q96HR3 178 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 PIWIL1Q96J94 861 aaKnown RBP7.05□□□□□ -1.28
CSDE1-204ENST00000369530 KLF16Q9BXK1 252 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-204ENST00000369530 STMN4Q9H169 189 aaPredicted RBP7.05□□□□□ -1.28
CSDE1-204ENST00000369530 NEUROG2Q9H2A3 272 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 MRPL17Q9NRX2 175 aaKnown RBP7.05□□□□□ -1.28
CSDE1-204ENST00000369530 DSEQ9UL01 958 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 CDH9Q9ULB4 789 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 CDH7Q9ULB5 785 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 PCDHGC3Q9UN70 934 aa7.05□□□□□ -1.28
CSDE1-204ENST00000369530 ADAMTS9Q9P2N4 1935 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ZSCAN5CA6NGD5 496 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 LRRC53A6NM62 1247 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ZBBXA8MT70 800 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 RGS13O14921 159 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ALOX15BO15296 676 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PSMG1O95456 288 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 CHRNB1P11230 501 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 SRFP11831 508 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PTPN4P29074 926 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 CLCN5P51795 746 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 RAP1GDS1P52306 607 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 KLHL30Q0D2K2 578 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 KCNH2Q12809 1159 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 TMEM132DQ14C87 1099 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 TGFBIQ15582 683 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 TMEM196Q5HYL7 178 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 C6orf118Q5T5N4 469 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 RASGEF1CQ8N431 466 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 MDM1Q8TC05 714 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ZNF398Q8TD17 642 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 EME1Q96AY2 570 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 COX4I2Q96KJ9 171 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 NSMCE3Q96MG7 304 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 LPIN3Q9BQK8 851 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PLGRKTQ9HBL7 147 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 ETNK1Q9HBU6 452 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 TMEM8AQ9HCN3 771 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 GPR27Q9NS67 375 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 INTS9Q9NV88 658 aaKnown RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 EHD2Q9NZN4 543 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 NOCTQ9UK39 431 aaKnown RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 TRIM33Q9UPN9 1127 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 GOLGA8IPA6NC78 632 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 GOLGA8JA6NMD2 632 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 CCDC188H7C350 402 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 MAP3K7O43318 606 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PDE5AO76074 875 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 FBXO21O94952 628 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PLEKP08567 350 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 CD48P09326 243 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 AOC1P19801 751 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 EIF4A3P38919 411 aaKnown RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 MESP2Q0VG99 397 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 EXOC3L4Q17RC7 722 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 EML3Q32P44 896 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PLA2G2CQ5R387 149 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 NET1Q7Z628 596 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 RASSF3Q86WH2 238 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 TTC30AQ86WT1 665 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 LURAP1LQ8IV03 231 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 RNF169Q8NCN4 708 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 KREMEN2Q8NCW0 462 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 SLC30A5Q8TAD4 765 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PGAP3Q96FM1 320 aaPredicted RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 HINFPQ9BQA5 517 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 MSTO1Q9BUK6 570 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 SLC46A2Q9BY10 475 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 IGSF9Q9P2J2 1179 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 CCDC195A0A1B0GUA6 201 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 K7EQS6 105 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 TRDMT1O14717 391 aaKnown RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 BUB1O43683 1085 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 PI15O43692 258 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 STK10O94804 968 aaKnown RBP7.04□□□□□ -1.28
CSDE1-204ENST00000369530 SLC18A1P54219 525 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 MYLK3Q32MK0 819 aa7.04□□□□□ -1.28
CSDE1-204ENST00000369530 GLRA4Q5JXX5 417 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms