RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 H3BNC9 293 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 J3KR12 359 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 NEBLO76041 1014 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 HLA-DQB2P05538 268 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 IVLP07476 585 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 PHBP35232 272 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 ACVRL1P37023 503 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 CDH4P55283 916 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 STAT4Q14765 748 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 OTOP3Q7RTS5 596 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 CROCCP2Q86T23 111 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 PALM2Q8IXS6 379 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 FAM76AQ8TAV0 307 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 SHKBP1Q8TBC3 707 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 MAML1Q92585 1016 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 CFAP36Q96G28 342 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 DDX50Q9BQ39 737 aaKnown RBP17.16■□□□□ 0.34
PHGDH-202ENST00000369409 MLPHQ9BV36 600 aaPredicted RBP17.16■□□□□ 0.34
PHGDH-202ENST00000369409 PIH1D1Q9NWS0 290 aaKnown RBP17.16■□□□□ 0.34
PHGDH-202ENST00000369409 MYLKQ15746 1914 aa17.16■□□□□ 0.34
PHGDH-202ENST00000369409 EXOC1LA0A1B0GW35 172 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 AP2A1O95782 977 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 LATS1O95835 1130 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 CPP00450 1065 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 YBEYP58557 167 aaPredicted RBP17.15■□□□□ 0.34
PHGDH-202ENST00000369409 SLC7A9P82251 487 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 CBLBQ13191 982 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 OLIG2Q13516 323 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 SERINC3Q13530 473 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 RTL10Q7L3V2 364 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 RBM23Q86U06 439 aaKnown RBP17.15■□□□□ 0.34
PHGDH-202ENST00000369409 MPP5Q8N3R9 675 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 PABPC5Q96DU9 382 aaKnown RBP17.15■□□□□ 0.34
PHGDH-202ENST00000369409 TCEAL4Q96EI5 215 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 CCDC77Q9BR77 488 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 RBM22Q9NW64 420 aaKnown RBP eCLIP17.15■□□□□ 0.34
PHGDH-202ENST00000369409 CTNNAL1Q9UBT7 734 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 STOML2Q9UJZ1 356 aa17.15■□□□□ 0.34
PHGDH-202ENST00000369409 NOVA2Q9UNW9 492 aaKnown RBP17.15■□□□□ 0.34
PHGDH-202ENST00000369409 A0A1B0GVM2 712 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 TCAF2A6NFQ2 919 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 RGS16O15492 202 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-202ENST00000369409 GREM1O60565 184 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 USP12O75317 370 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 CLDN11O75508 207 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 PEX11BO96011 259 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 MLNP12872 115 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 HOXA9P31269 272 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 EPHA5P54756 1037 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 C6orf118Q5T5N4 469 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 ZNF697Q5TEC3 545 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 LRRC8BQ6P9F7 803 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 Q6ZNB5 142 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 C3orf62Q6ZUJ4 267 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 ADGRD2Q7Z7M1 963 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 OR52K2Q8NGK3 314 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 LRRC39Q96DD0 335 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 PGM2Q96G03 612 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 OXNAD1Q96HP4 312 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-202ENST00000369409 PBX4Q9BYU1 374 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 GLOD4Q9HC38 313 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 UBP1Q9NZI7 540 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 CFAP97Q9P2B7 532 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 DNMT3BQ9UBC3 853 aaKnown RBP17.14■□□□□ 0.33
PHGDH-202ENST00000369409 LSM7Q9UK45 103 aaKnown RBP17.14■□□□□ 0.33
PHGDH-202ENST00000369409 TRANK1O15050 2925 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 TCEA3O75764 348 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 RHOP08100 348 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 PTPN2P17706 415 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 SESN2P58004 480 aaPredicted RBP17.14■□□□□ 0.33
PHGDH-202ENST00000369409 PRPSAP1Q14558 356 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 EFTUD2Q15029 972 aaKnown RBP eCLIP17.14■□□□□ 0.333e-6■■■■□ 23.9
PHGDH-202ENST00000369409 GPR158Q5T848 1215 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 KCTD11Q693B1 232 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 PDE12Q6L8Q7 609 aaKnown RBP17.14■□□□□ 0.33
PHGDH-202ENST00000369409 CHST9Q7L1S5 443 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 SPATA22Q8NHS9 363 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 FBF1Q8TES7 1133 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 ARHGEF2Q92974 986 aaKnown RBP17.14■□□□□ 0.33
PHGDH-202ENST00000369409 PKNOX2Q96KN3 472 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 SIGLEC10Q96LC7 697 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 SLC46A2Q9BY10 475 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 SMG9Q9H0W8 520 aaKnown RBP17.14■□□□□ 0.33
PHGDH-202ENST00000369409 NKX2-4Q9H2Z4 354 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 RETREG1Q9H6L5 497 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 ZC3H7BQ9UGR2 993 aaKnown RBP17.14■□□□□ 0.33
PHGDH-202ENST00000369409 HCFC2Q9Y5Z7 792 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 MAD1L1Q9Y6D9 718 aa17.14■□□□□ 0.33
PHGDH-202ENST00000369409 CDH23Q9H251 3354 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 C2orf16Q68DN1 1984 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 A0A0D9SEW6 157 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 ERI2A8K979 691 aaKnown RBP17.13■□□□□ 0.33
PHGDH-202ENST00000369409 SUN1O94901 812 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 C1RP00736 705 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 RHOCP08134 193 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 HNRNPA1P09651 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
PHGDH-202ENST00000369409 TSHRP16473 764 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 NR1D1P20393 614 aa17.13■□□□□ 0.33
PHGDH-202ENST00000369409 HPDP32754 393 aaPredicted RBP17.13■□□□□ 0.33
PHGDH-202ENST00000369409 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms