RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 ZNF75CPQ92670 426 aaPredicted RBP10.9□□□□□ -0.66
TPM3-212ENST00000368533 RAB3IPQ96QF0 476 aaPredicted RBP10.9□□□□□ -0.66
TPM3-212ENST00000368533 IQCGQ9H095 443 aaKnown RBP10.9□□□□□ -0.66
TPM3-212ENST00000368533 CCSER2Q9H7U1 834 aa10.9□□□□□ -0.66
TPM3-212ENST00000368533 NDFIP2Q9NV92 336 aa10.9□□□□□ -0.66
TPM3-212ENST00000368533 PRKAG3Q9UGI9 489 aa10.9□□□□□ -0.66
TPM3-212ENST00000368533 SLC24A2Q9UI40 661 aa10.9□□□□□ -0.66
TPM3-212ENST00000368533 RABGEF1Q9UJ41 708 aa10.9□□□□□ -0.66
TPM3-212ENST00000368533 DOCK6Q96HP0 2047 aa10.9□□□□□ -0.66
TPM3-212ENST00000368533 TRDMT1O14717 391 aaKnown RBP10.89□□□□□ -0.67
TPM3-212ENST00000368533 TNFRSF10BO14763 440 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 DGKIO75912 1065 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 LRIG2O94898 1065 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 ENDOD1O94919 500 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 FBXO21O94952 628 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 COL6A1P12109 1028 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 VAV1P15498 845 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 VASPP50552 380 aaPredicted RBP10.89□□□□□ -0.67
TPM3-212ENST00000368533 CRADDP78560 199 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 MAPRE1Q15691 268 aaKnown RBP10.89□□□□□ -0.67
TPM3-212ENST00000368533 PSMD5Q16401 504 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 PDK4Q16654 411 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 KLHL38Q2WGJ6 581 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 RNF43Q68DV7 783 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 BHMTQ93088 406 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 TMEM106CQ9BVX2 250 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 EURLQ9NYK6 297 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 UBP1Q9NZI7 540 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 SLC17A7Q9P2U7 560 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 MICAL3Q7RTP6 2002 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 CCDC78A2IDD5 438 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 NDC80O14777 642 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 METTL18O95568 372 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 F7P08709 466 aaPredicted RBP10.89□□□□□ -0.67
TPM3-212ENST00000368533 TROVE2P10155 538 aaKnown RBP eCLIP10.89□□□□□ -0.67
TPM3-212ENST00000368533 CCNB1P14635 433 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 DYNC1I2Q13409 638 aaKnown RBP10.89□□□□□ -0.67
TPM3-212ENST00000368533 TAZQ16635 292 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 C10orf120Q5SQS8 335 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 ARHGAP36Q6ZRI8 547 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 KDELC2Q7Z4H8 507 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 NUP93Q8N1F7 819 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 CRIPAKQ8N1N5 446 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 APBB2Q92870 758 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 PRDM12Q9H4Q4 367 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 CWH43Q9H720 699 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 CYP4F11Q9HBI6 524 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 CHKBQ9Y259 395 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 STARD13Q9Y3M8 1113 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 DFFAO00273 331 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 USP12O75317 370 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 CXCL10P02778 98 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 IRGCQ6NXR0 463 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 OTOAQ7RTW8 1153 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 ZNF354CQ86Y25 554 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 KBTBD2Q8IY47 623 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 PPM1NQ8N819 430 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 DENND1AQ8TEH3 1009 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 TMEM169Q96HH4 297 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 ZNF670Q9BS34 389 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 ZBED2Q9BTP6 218 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 ELAC1Q9H777 363 aaKnown RBP10.89□□□□□ -0.67
TPM3-212ENST00000368533 USP29Q9HBJ7 922 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 VANGL2Q9ULK5 521 aa10.89□□□□□ -0.67
TPM3-212ENST00000368533 FNDC1Q4ZHG4 1894 aaPredicted RBP10.88□□□□□ -0.67
TPM3-212ENST00000368533 PRPF4O43172 522 aaKnown RBP eCLIP10.88□□□□□ -0.67
TPM3-212ENST00000368533 LPXNO60711 386 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 EDF1O60869 148 aaKnown RBP10.88□□□□□ -0.67
TPM3-212ENST00000368533 ZNF189O75820 626 aaPredicted RBP10.88□□□□□ -0.67
TPM3-212ENST00000368533 DCTN3O75935 186 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 IRF1P10914 325 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 ATF6P18850 670 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 FGFR3P22607 806 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 WDR5P61964 334 aaKnown RBP10.88□□□□□ -0.67
TPM3-212ENST00000368533 CNKSR3Q6P9H4 555 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 C14orf80Q86SX3 495 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 TDRPQ86YL5 185 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 BADQ92934 168 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 IGSF21Q96ID5 467 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 CYTH2Q99418 400 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 APOL2Q9BQE5 337 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 ATXN10Q9UBB4 475 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 ZFP69BQ9UJL9 534 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 FBXW11Q9UKB1 542 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 MAD1L1Q9Y6D9 718 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 NLRC5Q86WI3 1866 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 MYO16Q9Y6X6 1858 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 INPPL1O15357 1258 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 PAGE1O75459 146 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 SEC24AO95486 1093 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 PTPN7P35236 360 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 MPP3Q13368 585 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 NFE2Q16621 373 aaPredicted RBP10.88□□□□□ -0.67
TPM3-212ENST00000368533 KBTBD12Q3ZCT8 623 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 TAF1BQ53T94 588 aaPredicted RBP10.88□□□□□ -0.67
TPM3-212ENST00000368533 HEATR6Q6AI08 1181 aaKnown RBP10.88□□□□□ -0.67
TPM3-212ENST00000368533 SLC9A4Q6AI14 798 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 NLRP9Q7RTR0 991 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 NECAB2Q7Z6G3 386 aa10.88□□□□□ -0.67
TPM3-212ENST00000368533 MTDHQ86UE4 582 aaKnown RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms