RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 E9PAM4 449 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 LDOC1O95751 146 aaPredicted RBP16.45■□□□□ 0.22
CKS1B-202ENST00000368436 C1SP09871 688 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 EPHA8P29322 1005 aaPredicted RBP16.45■□□□□ 0.22
CKS1B-202ENST00000368436 GGCXP38435 758 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 MTIF2P46199 727 aaKnown RBP16.45■□□□□ 0.22
CKS1B-202ENST00000368436 ARRB1P49407 418 aaPredicted RBP16.45■□□□□ 0.22
CKS1B-202ENST00000368436 CXCR3P49682 368 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 CDH4P55283 916 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 UBE2HP62256 183 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 CYP4F3Q08477 520 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 CNTN1Q12860 1018 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 MAN2A1Q16706 1144 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 ACCSLQ4AC99 568 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 BRMS1LQ5PSV4 323 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 AGBL4Q5VU57 503 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 KANSL1Q7Z3B3 1105 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 TMPRSS12Q86WS5 348 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 TRIM69Q86WT6 500 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 SPATS2Q86XZ4 545 aaKnown RBP16.45■□□□□ 0.22
CKS1B-202ENST00000368436 ZNF683Q8IZ20 524 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 OXR1Q8N573 874 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 PDCD7Q8N8D1 485 aaKnown RBP16.45■□□□□ 0.22
CKS1B-202ENST00000368436 PIP4K2CQ8TBX8 421 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 TSC1Q92574 1164 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 NT5C3BQ969T7 300 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 PGAP3Q96FM1 320 aaPredicted RBP16.45■□□□□ 0.22
CKS1B-202ENST00000368436 CNDP2Q96KP4 475 aaKnown RBP16.45■□□□□ 0.22
CKS1B-202ENST00000368436 ANLNQ9NQW6 1124 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 PIGVQ9NUD9 493 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 VPS28Q9UK41 221 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 HS3ST2Q9Y278 367 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 RAXQ9Y2V3 346 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 ARID1BQ8NFD5 2236 aaPredicted RBP16.45■□□□□ 0.22
CKS1B-202ENST00000368436 MYLKQ15746 1914 aa16.45■□□□□ 0.22
CKS1B-202ENST00000368436 C1QTNF3-AMACRE9PGA6 284 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 I6L893 689 aaPredicted RBP16.44■□□□□ 0.22
CKS1B-202ENST00000368436 CBX4O00257 560 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 CNTN5O94779 1100 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 ADCY5O95622 1261 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 PNMA6AP0CW24 399 aaPredicted RBP16.44■□□□□ 0.22
CKS1B-202ENST00000368436 CDK4P11802 303 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 CDH5P33151 784 aaPredicted RBP16.44■□□□□ 0.22
CKS1B-202ENST00000368436 TAS2R38P59533 333 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 BPIFB4P59827 614 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 OVGP1Q12889 678 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 BNIP3Q12983 259 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 COL28A1Q2UY09 1125 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 CCDC157Q569K6 752 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 SFMBT2Q5VUG0 894 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 Q6ZVU0 165 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 EID2Q8N6I1 236 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 PSMB7Q99436 277 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 TKTL2Q9H0I9 626 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 SIK2Q9H0K1 926 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 WDCPQ9H6R7 721 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 SYNCQ9H7C4 482 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 SCUBE2Q9NQ36 999 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 PLCB1Q9NQ66 1216 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 TMEM51Q9NW97 253 aa16.44■□□□□ 0.22
CKS1B-202ENST00000368436 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.44■□□□□ 0.22
CKS1B-202ENST00000368436 DRGXA6NNA5 263 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 MAGEC1O60732 1142 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 MT-CO1P00395 513 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 F9P00740 461 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 SRCP12931 536 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 ZNF18P17022 549 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 TFE3P19532 575 aaPredicted RBP16.43■□□□□ 0.22
CKS1B-202ENST00000368436 MAT2AP31153 395 aaKnown RBP16.43■□□□□ 0.22
CKS1B-202ENST00000368436 SCNN1AP37088 669 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 GABRB2P47870 512 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 ACADVLP49748 655 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 KRT83P78385 493 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 COL9A2Q14055 689 aaPredicted RBP16.43■□□□□ 0.22
CKS1B-202ENST00000368436 ALFQ53S48 1182 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 ARTNQ5T4W7 220 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 PDZD3Q86UT5 571 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 C1orf74Q96LT6 269 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 MUC3BQ9H195 1237 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 NDST4Q9H3R1 872 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 PREBQ9HCU5 417 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 STAP1Q9ULZ2 295 aa16.43■□□□□ 0.22
CKS1B-202ENST00000368436 NBEAQ8NFP9 2946 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 KNTC1P50748 2209 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 URB1O60287 2271 aaKnown RBP16.42■□□□□ 0.22
CKS1B-202ENST00000368436 PRAMEF26H0Y7S4 382 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 RFPL3O75679 317 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 CTSLP07711 333 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 DNAJC3Q13217 504 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 STAT4Q14765 748 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 TPD52L1Q16890 204 aaPredicted RBP16.42■□□□□ 0.22
CKS1B-202ENST00000368436 SLC25A52Q3SY17 297 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 VWA3BQ502W6 1294 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 SETMARQ53H47 684 aaPredicted RBP16.42■□□□□ 0.22
CKS1B-202ENST00000368436 MIIPQ5JXC2 388 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 PIP5KL1Q5T9C9 394 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 SETD3Q86TU7 594 aaPredicted RBP16.42■□□□□ 0.22
CKS1B-202ENST00000368436 FAM114A1Q8IWE2 563 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 TMEM35BQ8NCS4 154 aa16.42■□□□□ 0.22
CKS1B-202ENST00000368436 OR2A12Q8NGT7 310 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms