RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 UBTFL6P0CB48 400 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 NDUFV1P49821 464 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 CTBP1Q13363 440 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 EML3Q32P44 896 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 ANKS6Q68DC2 871 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 SCARA3Q6AZY7 606 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 SLC41A1Q8IVJ1 513 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 UPF1Q92900 1129 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 OTULINQ96BN8 352 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 NDNQ99608 321 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 RBBP8Q99708 897 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 TTPALQ9BTX7 342 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 TMEM161AQ9NX61 479 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 MEI4A8MW99 385 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 PFDN1O60925 122 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 ALADP13716 330 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 DDX5P17844 614 aaKnown RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 KCNA3P22001 575 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 ABL2P42684 1182 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 CRHR2Q13324 411 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 KYAT3Q6YP21 454 aaKnown RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 MSL3Q8N5Y2 521 aaKnown RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 YIPF2Q9BWQ6 316 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 TRMT13Q9NUP7 481 aaKnown RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 SYBUQ9NX95 663 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 CACNG4Q9UBN1 327 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 HMGXB4Q9UGU5 601 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 SYNCRIPO60506 623 aaKnown RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 DNAJC8O75937 253 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 PYROXD2Q8N2H3 581 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 MIER2Q8N344 545 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 GRIN3AQ8TCU5 1115 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 FNIP1Q8TF40 1166 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.5□□□□□ -0.414e-27■■■□□ 15.4
PTPRK-203ENST00000368207 LRRC4CQ9HCJ2 640 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 ARL5CA6NH57 179 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 TBL1XO60907 577 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 ABHD2P08910 425 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 HOXD13P35453 343 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 CCNG1P51959 295 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 RAP1GDS1P52306 607 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 PLOD1Q02809 727 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 ASTE1Q2TB18 679 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 SLC26A9Q7LBE3 791 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 SLC44A2Q8IWA5 706 aaPredicted RBP12.5□□□□□ -0.41
PTPRK-203ENST00000368207 MYLK2Q9H1R3 596 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 POMKQ9H5K3 350 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 ALG9Q9H6U8 611 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 BPIFA1Q9NP55 256 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 HPS4Q9NQG7 708 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 PCDHA11Q9Y5I1 949 aa12.5□□□□□ -0.41
PTPRK-203ENST00000368207 CICQ96RK0 1608 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 MFSD11O43934 449 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 CCDC166P0CW27 439 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 MSH3P20585 1137 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 ATP6V1E1P36543 226 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 VHLP40337 213 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 CAMK2GQ13555 558 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 POM121L1PQ3SYA9 428 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 PCED1BQ96HM7 432 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 CCDC134Q9H6E4 229 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 ZDHHC6Q9H6R6 413 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 CATSPERZQ9NTU4 200 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 PLK2Q9NYY3 685 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 OR6C75A6NL08 312 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 SNX3O60493 162 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 HSPA1AP0DMV8 641 aaKnown RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 HSPA1BP0DMV9 641 aaKnown RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 CTNNB1P35222 781 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 ATP6AP1LQ52LC2 224 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 TRMT11Q7Z4G4 463 aaKnown RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 TRIM48Q8IWZ4 208 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 METTL6Q8TCB7 284 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 ABTB1Q969K4 478 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 VPS50Q96JG6 964 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 FGFR1P11362 822 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 UNGP13051 313 aaPredicted RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 SELPP16109 830 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 SERPINA4P29622 427 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 SLC5A3P53794 718 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 WNT3AP56704 352 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 SPATA6LQ8N4H0 392 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 FIBCD1Q8N539 461 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 OMDQ99983 421 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 GMIPQ9P107 970 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 SNX13Q9Y5W8 968 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 FAM237BA0A1B0GVD1 139 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 GNG14A0A1W2PPG7 69 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 CFHP08603 1231 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 ATXN1P54253 815 aaKnown RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 BST1Q10588 318 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 CERCAMQ5T4B2 595 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 SLC39A4Q6P5W5 647 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 PHACTR4Q8IZ21 702 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 SPPL2BQ8TCT7 592 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 PLEKHO2Q8TD55 490 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 DQX1Q8TE96 717 aaKnown RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 TMEM159Q96B96 161 aa12.49□□□□□ -0.41
PTPRK-203ENST00000368207 PPP1R10Q96QC0 940 aaKnown RBP12.49□□□□□ -0.41
PTPRK-203ENST00000368207 KCTD15Q96SI1 283 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms