RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 NPTX2P47972 431 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 ARID5AQ03989 594 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 TDRD10Q5VZ19 366 aaKnown RBP11.62□□□□□ -0.55
ATXN3-201ENST00000340660 Q71RC1 249 aaPredicted RBP11.62□□□□□ -0.55
ATXN3-201ENST00000340660 TGIF2LYQ8IUE0 185 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 CCDC83Q8IWF9 413 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 SLC35F3Q8IY50 421 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 CACNA2D3Q8IZS8 1091 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 Q8NA96 180 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 OR14C36Q8NHC7 312 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 WFDC12Q8WWY7 111 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 PTPRN2Q92932 1015 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 NAT6Q93015 286 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 MYLPFQ96A32 169 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 TMEM74Q96NL1 305 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 GFM1Q96RP9 751 aaKnown RBP11.62□□□□□ -0.55
ATXN3-201ENST00000340660 B3GNT4Q9C0J1 378 aa11.62□□□□□ -0.55
ATXN3-201ENST00000340660 TNRC6AQ8NDV7 1962 aaKnown RBP11.61□□□□□ -0.55
ATXN3-201ENST00000340660 CCDC169A6NNP5 214 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 KRT86O43790 486 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 ANXA13P27216 316 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 NOS3P29474 1203 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 CCL7P80098 99 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 CST6Q15828 149 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 C20orf194Q5TEA3 1177 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 PRPF39Q86UA1 669 aaKnown RBP11.61□□□□□ -0.55
ATXN3-201ENST00000340660 SLC22A18ASQ8N1D0 253 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 AADATQ8N5Z0 425 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 TMEM145Q8NBT3 493 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 LRRN4CLQ8ND94 238 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 HDAC11Q96DB2 347 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 OMDQ99983 421 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 BOCQ9BWV1 1114 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 DLL4Q9NR61 685 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 TMEM30AQ9NV96 361 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 MAGEC2Q9UBF1 373 aaPredicted RBP11.61□□□□□ -0.55
ATXN3-201ENST00000340660 CHORDC1Q9UHD1 332 aaPredicted RBP11.61□□□□□ -0.55
ATXN3-201ENST00000340660 CYTH4Q9UIA0 394 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 PCDHA4Q9UN74 947 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 RPH3AQ9Y2J0 694 aaPredicted RBP11.61□□□□□ -0.55
ATXN3-201ENST00000340660 KCTD3Q9Y597 815 aa11.61□□□□□ -0.55
ATXN3-201ENST00000340660 FLNAP21333 2647 aaKnown RBP11.61□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3DA0A087WVF3 549 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3IA0A087WXS9 549 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3EA0A087X179 549 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3KA0A087X1G2 549 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3FA6NER0 549 aaPredicted RBP11.6□□□□□ -0.55
ATXN3-201ENST00000340660 ANKUB1A6NFN9 424 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3LB9A6J9 549 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TIMM44O43615 452 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 FAM189A1O60320 539 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 GHRHP01286 108 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3HP0C7X1 549 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 KLK2P20151 261 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TUBP50607 506 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 CACNA2D1P54289 1103 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 PEX3P56589 373 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 ZFP36L1Q07352 338 aaKnown RBP11.6□□□□□ -0.55
ATXN3-201ENST00000340660 SNX30Q5VWJ9 437 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3GQ6DHY5 549 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3CQ6IPX1 549 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 C4orf50Q6ZRC1 276 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 ZC3H3Q8IXZ2 948 aaKnown RBP11.6□□□□□ -0.55
ATXN3-201ENST00000340660 SLFN12Q8IYM2 578 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TBC1D3Q8IZP1 549 aaPredicted RBP11.6□□□□□ -0.55
ATXN3-201ENST00000340660 OR13H1Q8NG92 308 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TMEM159Q96B96 161 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 TSPAN18Q96SJ8 248 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 DNAJC28Q9NX36 388 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 GGT7Q9UJ14 662 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 DMTF1Q9Y222 760 aa11.6□□□□□ -0.55
ATXN3-201ENST00000340660 CLDN3O15551 220 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 LRRTM2O43300 516 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 PPP6R2O75170 966 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 RFPL1O75677 317 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 CCL4P13236 92 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 COX6B1P14854 86 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 PGFP49763 221 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 HNRNPKP61978 463 aaKnown RBP eCLIP11.59□□□□□ -0.55
ATXN3-201ENST00000340660 PSMC1P62191 440 aaKnown RBP11.59□□□□□ -0.55
ATXN3-201ENST00000340660 TMEM132DQ14C87 1099 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 NPY5RQ15761 445 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 AHI1Q8N157 1196 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 SDR16C5Q8N3Y7 309 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 KIFAP3Q92845 792 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 FBXO32Q969P5 355 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 C8orf48Q96LL4 319 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 NOX5Q96PH1 765 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 CMKLR1Q99788 373 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 MYOCQ99972 504 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 CALN1Q9BXU9 219 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 GPN2Q9H9Y4 310 aaPredicted RBP11.59□□□□□ -0.55
ATXN3-201ENST00000340660 CRTAC1Q9NQ79 661 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 PCDHA5Q9Y5H7 936 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 CSNK1G3Q9Y6M4 447 aa11.59□□□□□ -0.55
ATXN3-201ENST00000340660 PRRC2AP48634 2157 aaKnown RBP11.59□□□□□ -0.55
ATXN3-201ENST00000340660 VPS13CQ709C8 3753 aa11.58□□□□□ -0.55
ATXN3-201ENST00000340660 PRAMEF26H0Y7S4 382 aa11.58□□□□□ -0.56
ATXN3-201ENST00000340660 CCNT1O60563 726 aaKnown RBP11.58□□□□□ -0.56
ATXN3-201ENST00000340660 RAD1O60671 282 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms