RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 FNDC1Q4ZHG4 1894 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ERI2A8K979 691 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MTSS1O43312 755 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PAGE1O75459 146 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RPLP2P05387 115 aaKnown RBP13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TPH1P17752 444 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GTF2A1P52655 376 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GRTP1Q5TC63 336 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 C14orf80Q86SX3 495 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 METTL23Q86XA0 190 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 C10orf107Q8IVU9 208 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SPATA22Q8NHS9 363 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 FBXO27Q8NI29 283 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NSL1Q96IY1 281 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 UROC1Q96N76 676 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 VAT1Q99536 393 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 EBF4Q9BQW3 602 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DENND2DQ9H6A0 471 aaPredicted RBP13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SPC25Q9HBM1 224 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CHRAC1Q9NRG0 131 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZFATQ9P243 1243 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SFMBT1Q9UHJ3 866 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ADAM28Q9UKQ2 775 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DSEQ9UL01 958 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PCDHB8Q9UN66 801 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SOX13Q9UN79 622 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TTC3P53804 2025 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SHROOM3Q8TF72 1996 aa13.24□□□□□ -0.29
CDK5RAP1-201ENST00000339269 E2F8A0AVK6 867 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 KCNU1A8MYU2 1149 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZNF195O14628 629 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MAFKO60675 156 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 EN2P19622 333 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CCND1P24385 295 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NMBRP28336 390 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SERPINB6P35237 376 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZNF33AQ06730 810 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 STX3Q13277 289 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DLG2Q15700 870 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 INSCQ1MX18 579 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TTC8Q8TAM2 541 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 USP33Q8TEY7 942 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 HAPLN3Q96S86 360 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 IL12RB2Q99665 862 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NOL6Q9H6R4 1146 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 YY1AP1Q9H869 796 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 THAP1Q9NVV9 213 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 BFARQ9NZS9 450 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ARHGAP42A6NI28 874 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ATP9BO43861 1147 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SRGAP2BP0DMP2 458 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 KITP10721 976 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GNAZP19086 355 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ADRA1AP35348 466 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GJA8P48165 433 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GPR15P49685 360 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 AQP5P55064 265 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 IRF9Q00978 393 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ITGA7Q13683 1181 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 BRMS1LQ5PSV4 323 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RABGAP1LQ5R372 815 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ITPRIPL1Q6GPH6 555 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 FSTL4Q6MZW2 842 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 STRA8Q7Z7C7 330 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZNF683Q8IZ20 524 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ATP2A3Q93084 1043 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 BTBD10Q9BSF8 475 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 KIFC1Q9BW19 673 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CCDC106Q9BWC9 280 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SLC39A8Q9C0K1 460 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SIK2Q9H0K1 926 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CAB39LQ9H9S4 337 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 TAS2R1Q9NYW7 299 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NUDT5Q9UKK9 219 aa13.23□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NYNRINQ9P2P1 1898 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 A0A1W2PQH9 124 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 G3V2L1 256 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GSC2O15499 205 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 HNRNPCL1O60812 293 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ANP32DO95626 131 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ARNTP27540 789 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 GABRB3P28472 473 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CYP2C18P33260 490 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 NPY2RP49146 381 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 HSP90AA5PQ58FG0 334 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 SDHAF4Q5VUM1 108 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RWDD4Q6NW29 188 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 C4orf50Q6ZRC1 276 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 CRLF3Q8IUI8 442 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 FCRL2Q96LA5 508 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ZCWPW1Q9H0M4 648 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 RNPEPL1Q9HAU8 725 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 ABCC13Q9NSE7 274 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 COPG2Q9UBF2 871 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DCDC2Q9UHG0 476 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 MAGED2Q9UNF1 606 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 DNAJC16Q9Y2G8 782 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 BPTFQ12830 3046 aa13.22□□□□□ -0.29
CDK5RAP1-201ENST00000339269 PEX11BO96011 259 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms