RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 RHDQ02161 417 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 GCNT1Q02742 428 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 KCNMA1Q12791 1236 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 CETN1Q12798 172 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 EIF4EBP2Q13542 120 aaPredicted RBP11.81□□□□□ -0.52
CSMD2-202ENST00000338325 TAF1BQ53T94 588 aaPredicted RBP11.81□□□□□ -0.52
CSMD2-202ENST00000338325 DENND1BQ6P3S1 775 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 Q6ZVU0 165 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 RRAGAQ7L523 313 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 TMC6Q7Z403 805 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 ARHGEF19Q8IW93 802 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 LSMEM2Q8N112 164 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 LMO3Q8TAP4 145 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 STK32AQ8WU08 396 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 ALG14Q96F25 216 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 NAF1Q96HR8 494 aaKnown RBP11.81□□□□□ -0.52
CSMD2-202ENST00000338325 HIC2Q96JB3 615 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 PPP1R9BQ96SB3 815 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 MYOCQ99972 504 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 SLC4A5Q9BY07 1137 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 FAM204AQ9H8W3 233 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 KLHL11Q9NVR0 708 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 UCKL1Q9NWZ5 548 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 E5RJQ4 531 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 P4HA2O15460 535 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 DXOO77932 396 aaKnown RBP11.81□□□□□ -0.52
CSMD2-202ENST00000338325 MPOP05164 745 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 ALPPL2P10696 532 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 SLC2A3P11169 496 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 PRLRP16471 622 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 TAS2R38P59533 333 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 ERVPABLB-1P60509 514 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 YWHAZP63104 245 aaKnown RBP11.81□□□□□ -0.52
CSMD2-202ENST00000338325 CENPCQ03188 943 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 DLG2Q15700 870 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 MEA1Q16626 185 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 CCDC40Q4G0X9 1142 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 PIP5KL1Q5T9C9 394 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 NEK5Q6P3R8 708 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 SH2D3CQ8N5H7 860 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 WBP1Q96G27 269 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 RPRD1AQ96P16 312 aaPredicted RBP11.81□□□□□ -0.52
CSMD2-202ENST00000338325 GSDMAQ96QA5 445 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 MED15Q96RN5 788 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 FEM1AQ9BSK4 669 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 THAP9Q9H5L6 903 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 NLGN3Q9NZ94 848 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 ZDHHC9Q9Y397 364 aa11.81□□□□□ -0.52
CSMD2-202ENST00000338325 COL6A6A6NMZ7 2263 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 A0A1W2PQU0 124 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 SLC31A1O15431 190 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 BNIP3LO60238 219 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 USP12O75317 370 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 CSO75390 466 aaKnown RBP11.8□□□□□ -0.52
CSMD2-202ENST00000338325 PIAS2O75928 621 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 GP1BAP07359 652 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 GIMD1P0DJR0 217 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 KRT5P13647 590 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 HNRNPA2B1P22626 353 aaKnown RBP11.8□□□□□ -0.52
CSMD2-202ENST00000338325 AKT2P31751 481 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 CCR1P32246 355 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 FBXL22Q6P050 247 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 TMEM110Q86TL2 294 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 OR13H1Q8NG92 308 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 OR52K2Q8NGK3 314 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 KCNE4Q8WWG9 221 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 KLK6Q92876 244 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 RNF34Q969K3 372 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 APOLD1Q96LR9 279 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 CEP63Q96MT8 703 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 KREMEN1Q96MU8 473 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 CALN1Q9BXU9 219 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 GTPBP4Q9BZE4 634 aaKnown RBP11.8□□□□□ -0.52
CSMD2-202ENST00000338325 USP29Q9HBJ7 922 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 CPNE5Q9HCH3 593 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 FZD3Q9NPG1 666 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 EVA1BQ9NVM1 165 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 VPS28Q9UK41 221 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 CNTN6Q9UQ52 1028 aa11.8□□□□□ -0.52
CSMD2-202ENST00000338325 TRPM6Q9BX84 2022 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 SYNJ2BP-COX16A0A087WUM0 186 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.79□□□□□ -0.52
CSMD2-202ENST00000338325 PSMA7O14818 248 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 MED7O43513 233 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 SMC2O95347 1197 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 CTSLP07711 333 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 LSSP48449 732 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 DUSP3P51452 185 aaPredicted RBP11.79□□□□□ -0.52
CSMD2-202ENST00000338325 IRAK1P51617 712 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 CDK17Q00537 523 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 CCDC15Q0P6D6 951 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 ZNF177Q13360 481 aaPredicted RBP11.79□□□□□ -0.52
CSMD2-202ENST00000338325 ZNF284Q2VY69 593 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 ARHGAP40Q5TG30 622 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 HORMAD1Q86X24 394 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 SMARCE1Q969G3 411 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 IFT43Q96FT9 208 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 CCDC114Q96M63 670 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 POLR1BQ9H9Y6 1135 aa11.79□□□□□ -0.52
CSMD2-202ENST00000338325 DDIT4Q9NX09 232 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms