RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 NMRAL1Q9HBL8 299 aa11.48□□□□□ -0.57
GINS3-202ENST00000328514 PTPRHQ9HD43 1115 aa11.48□□□□□ -0.57
GINS3-202ENST00000328514 INIPQ9NRY2 104 aa11.48□□□□□ -0.57
GINS3-202ENST00000328514 GPATCH2LQ9NWQ4 482 aa11.48□□□□□ -0.57
GINS3-202ENST00000328514 DUS2Q9NX74 493 aaKnown RBP11.48□□□□□ -0.57
GINS3-202ENST00000328514 CDYLQ9Y232 598 aa11.48□□□□□ -0.57
GINS3-202ENST00000328514 PTPRFP10586 1907 aa11.48□□□□□ -0.57
GINS3-202ENST00000328514 A0A096LPK6 155 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 BOLA2-SMG1P6H3BVE0 249 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 TRIM24O15164 1050 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 PAPSS1O43252 624 aaPredicted RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 CABYRO75952 493 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 BAIAP3O94812 1187 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 IL18RAPO95256 599 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 PDGFRBP09619 1106 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 MPSTP25325 297 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 SDC4P31431 198 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 ATICP31939 592 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 MSX2P35548 267 aaPredicted RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 CDH8P55286 799 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 NAA20P61599 178 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 INCA1Q0VD86 236 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 BTG3Q14201 252 aaPredicted RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 TGFBIQ15582 683 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 NRF1Q16656 503 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 LIPMQ5VYY2 423 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 FSTL4Q6MZW2 842 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 CMC1Q7Z7K0 106 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 ZBTB33Q86T24 672 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 TMEM151AQ8N4L1 468 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 TNIP2Q8NFZ5 429 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 CXorf38Q8TB03 319 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 GRIN3AQ8TCU5 1115 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 KHSRPQ92945 711 aaKnown RBP eCLIP11.47□□□□□ -0.57
GINS3-202ENST00000328514 USP13Q92995 863 aaPredicted RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 ATP6V1E2Q96A05 226 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 AKT1S1Q96B36 256 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 SLCO4A1Q96BD0 722 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 C12orf43Q96C57 262 aaKnown RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 PIWIL1Q96J94 861 aaKnown RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 CNDP2Q96KP4 475 aaKnown RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 TCHPQ9BT92 498 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 C11orf84Q9BUA3 381 aaPredicted RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 DNAI2Q9GZS0 605 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 CAAP1Q9H8G2 361 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 DTLQ9NZJ0 730 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 HESX1Q9UBX0 185 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 HMGXB4Q9UGU5 601 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 ZNF232Q9UNY5 417 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 TDRKHQ9Y2W6 561 aaKnown RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 PCDHGA7Q9Y5G6 932 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 HEMK1Q9Y5R4 338 aaPredicted RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 ANK1P16157 1881 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 STX16-NPEPL1H3BU86 382 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 XPO1O14980 1071 aaKnown RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 CFLARO15519 480 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 MAFO75444 373 aaPredicted RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 MAP3K6O95382 1288 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 AMHP03971 560 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 DCKP27707 260 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 GABRB3P28472 473 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 ICAM3P32942 547 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 PTPN9P43378 593 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 CSE1LP55060 971 aaKnown RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 OXCT1P55809 520 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 CRADDP78560 199 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 CTBSQ01459 385 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 MPP3Q13368 585 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 CDO1Q16878 200 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 OR6B2Q6IFH4 312 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 TMEM135Q86UB9 458 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 TTC39CQ8N584 583 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 CENPIQ92674 756 aaPredicted RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 PGBD4Q96DM1 585 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 HNRNPABQ99729 332 aaKnown RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 SLC29A1Q99808 456 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 EFHD1Q9BUP0 239 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 TMEM165Q9HC07 324 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 RNF146Q9NTX7 359 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 SLC38A7Q9NVC3 462 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 ANKRD6Q9Y2G4 727 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 ZNF711Q9Y462 761 aa11.47□□□□□ -0.57
GINS3-202ENST00000328514 COPG1Q9Y678 874 aaKnown RBP11.47□□□□□ -0.57
GINS3-202ENST00000328514 PSME4Q14997 1843 aa11.46□□□□□ -0.57
GINS3-202ENST00000328514 CLRN2A0PK11 232 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 PIK3R2O00459 728 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 VWA5AO00534 786 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 TIMM44O43615 452 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 ZNF189O75820 626 aaPredicted RBP11.46□□□□□ -0.58
GINS3-202ENST00000328514 LTFP02788 710 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 C2P06681 752 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 CHRNGP07510 517 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 PFKMP08237 780 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 ERVK-10P10266 1014 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 C7P10643 843 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 MCF2P10911 925 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 MYF6P23409 242 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 SESN2P58004 480 aaPredicted RBP11.46□□□□□ -0.58
GINS3-202ENST00000328514 PSME3P61289 254 aa11.46□□□□□ -0.58
GINS3-202ENST00000328514 KIZQ2M2Z5 673 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms