RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 FBXL18Q96ME1 805 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 EFCAB1Q9HAE3 211 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 RABGEF1Q9UJ41 708 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 MYH1P12882 1939 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 ITGB4P16144 1822 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 SMCHD1A6NHR9 2005 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 CXCL11O14625 94 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 MFSD11O43934 449 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 MAN1A2O60476 641 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 SNX2O60749 519 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 EDN1P05305 212 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 FAM83EQ2M2I3 478 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 NAPEPLDQ6IQ20 393 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 IGDCC3Q8IVU1 814 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.53■□□□□ 0.08
VARS2-201ENST00000321897 TINF2Q9BSI4 451 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 ABHD16BQ9H3Z7 469 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 CCDC167Q9P0B6 97 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 RBPJLQ9UBG7 517 aa15.53■□□□□ 0.08
VARS2-201ENST00000321897 DYTNA2CJ06 578 aa15.52■□□□□ 0.08
VARS2-201ENST00000321897 CCR1P32246 355 aa15.52■□□□□ 0.08
VARS2-201ENST00000321897 KPNA2P52292 529 aaKnown RBP15.52■□□□□ 0.08
VARS2-201ENST00000321897 MFSD10Q14728 455 aa15.52■□□□□ 0.08
VARS2-201ENST00000321897 OLFML1Q6UWY5 402 aa15.52■□□□□ 0.08
VARS2-201ENST00000321897 FRA10AC1Q70Z53 315 aa15.52■□□□□ 0.08
VARS2-201ENST00000321897 LDB1Q86U70 411 aaPredicted RBP15.52■□□□□ 0.08
VARS2-201ENST00000321897 C10orf107Q8IVU9 208 aa15.52■□□□□ 0.08
VARS2-201ENST00000321897 RHOBTB2Q9BYZ6 727 aa15.52■□□□□ 0.08
VARS2-201ENST00000321897 DAPK2Q9UIK4 370 aa15.52■□□□□ 0.08
VARS2-201ENST00000321897 IQCA1LA6NCM1 817 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 ITGB6P18564 788 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 FDFT1P37268 417 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 MYO1HQ8N1T3 1032 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 PARP8Q8N3A8 854 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 ZNF398Q8TD17 642 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 CD101Q93033 1021 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 DCUN1D1Q96GG9 259 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 GBA2Q9HCG7 927 aaPredicted RBP15.52■□□□□ 0.07
VARS2-201ENST00000321897 LNPEPQ9UIQ6 1025 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 BAG5Q9UL15 447 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 C9JVG2 144 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 B4GALT4O60513 344 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 ABHD2P08910 425 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 SMIM10L2AP0DMW4 78 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 SMIM10L2BP0DMW5 78 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 HNRNPLP14866 589 aaKnown RBP eCLIP15.52■□□□□ 0.07
VARS2-201ENST00000321897 GP5P40197 560 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 MBTD1Q05BQ5 628 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 NOMO1Q15155 1222 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 CYP1B1Q16678 543 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 AGKQ53H12 422 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 ILDR2Q71H61 639 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 DACT3Q96B18 629 aaPredicted RBP15.52■□□□□ 0.07
VARS2-201ENST00000321897 CSPG4P5Q96PW8 444 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 PCYT2Q99447 389 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 EPB41L4BQ9H329 900 aa15.52■□□□□ 0.07
VARS2-201ENST00000321897 MARF1Q9Y4F3 1742 aaKnown RBP15.51■□□□□ 0.07
VARS2-201ENST00000321897 AP3B1O00203 1094 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 TRDMT1O14717 391 aaKnown RBP15.51■□□□□ 0.07
VARS2-201ENST00000321897 PRPF4O43172 522 aaKnown RBP eCLIP15.51■□□□□ 0.071e-6■■□□□ 13.8
VARS2-201ENST00000321897 PIGNO95427 931 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 LDLRAP1Q5SW96 308 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 GLB1LQ6UWU2 654 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.51■□□□□ 0.07
VARS2-201ENST00000321897 SPATA22Q8NHS9 363 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 ZFRQ96KR1 1074 aaKnown RBP15.51■□□□□ 0.07
VARS2-201ENST00000321897 SUN2Q9UH99 717 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 MDM4O15151 490 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 TRMUO75648 421 aaKnown RBP15.51■□□□□ 0.07
VARS2-201ENST00000321897 CSH1P0DML2 217 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 CSH2P0DML3 217 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 GPX6P59796 221 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 SEL1L3Q68CR1 1132 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 NKD2Q969F2 451 aaPredicted RBP15.51■□□□□ 0.07
VARS2-201ENST00000321897 CAMKK2Q96RR4 588 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 EBNA1BP2Q99848 306 aaKnown RBP15.51■□□□□ 0.07
VARS2-201ENST00000321897 LGALS13Q9UHV8 139 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 MYRFQ9Y2G1 1151 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 ACOT9Q9Y305 439 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 ATP8B3O60423 1300 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 SMIM28A0A1B0GU29 152 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 SUPT3HB4E1H0 165 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 TPD52L2O43399 206 aaKnown RBP15.51■□□□□ 0.07
VARS2-201ENST00000321897 KRT75O95678 551 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 LTFP02788 710 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 STMN1P16949 149 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 ZNF23P17027 643 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 CHRM3P20309 590 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 NR4A1P22736 598 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 GPD2P43304 727 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 BFSP2Q13515 415 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 GPR107Q5VW38 600 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 OTOP3Q7RTS5 596 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 PQLC1Q8N2U9 271 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 KLHL5Q96PQ7 755 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 GPAMQ9HCL2 828 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 CHRAC1Q9NRG0 131 aa15.51■□□□□ 0.07
VARS2-201ENST00000321897 RPL26L1Q9UNX3 145 aaKnown RBP15.51■□□□□ 0.07
VARS2-201ENST00000321897 MAP1BP46821 2468 aaKnown RBP15.51■□□□□ 0.07
VARS2-201ENST00000321897 CHD4Q14839 1912 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms