RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 ANKRD13AQ8IZ07 590 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 PHC3Q8NDX5 983 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 BHLHE22Q8NFJ8 381 aaPredicted RBP11.46□□□□□ -0.57
GCN1-201ENST00000300648 SHCBP1LQ9BZQ2 653 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 TRIM17Q9Y577 477 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 FOXN3O00409 490 aaPredicted RBP11.46□□□□□ -0.57
GCN1-201ENST00000300648 RPS6KA3P51812 740 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 TXNDC11Q6PKC3 985 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 DNAJB7Q7Z6W7 309 aaPredicted RBP11.46□□□□□ -0.57
GCN1-201ENST00000300648 TRPC4Q9UBN4 977 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 A0A087WZ62 844 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 CSF1RP07333 972 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 PCNAP12004 261 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 CDH4P55283 916 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 LMBRD2Q68DH5 695 aaPredicted RBP11.46□□□□□ -0.57
GCN1-201ENST00000300648 ZNF34Q8IZ26 560 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 CKAP2Q8WWK9 683 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 TRIT1Q9H3H1 467 aaKnown RBP11.46□□□□□ -0.57
GCN1-201ENST00000300648 PNPLA8Q9NP80 782 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 MID1IP1Q9NPA3 183 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 SLC9A8Q9Y2E8 581 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 SUPT20HL2P0C7V6 817 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 SLC2A4P14672 509 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 CYP2F1P24903 491 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 CCR1P32246 355 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 RRP1BQ14684 758 aaKnown RBP11.46□□□□□ -0.57
GCN1-201ENST00000300648 ESRP1Q6NXG1 681 aaKnown RBP11.46□□□□□ -0.57
GCN1-201ENST00000300648 MPZL3Q6UWV2 235 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 RNF180Q86T96 592 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 GPRC5AQ8NFJ5 357 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 TEFMQ96QE5 360 aaKnown RBP11.46□□□□□ -0.57
GCN1-201ENST00000300648 C1QTNF1Q9BXJ1 281 aa11.46□□□□□ -0.57
GCN1-201ENST00000300648 LINC00854A0A1B0GVQ3 168 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 ATF6P18850 670 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 POLD2P49005 469 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 PDK4Q16654 411 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 PHACTR4Q8IZ21 702 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 NKAPQ8N5F7 415 aaKnown RBP11.46□□□□□ -0.58
GCN1-201ENST00000300648 POMGNT2Q8NAT1 580 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 HTR3CQ8WXA8 447 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 USP7Q93009 1102 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 TATDN2Q93075 761 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 PPP3R2Q96LZ3 170 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 MRPL57Q9BQC6 102 aaKnown RBP11.46□□□□□ -0.58
GCN1-201ENST00000300648 JMJD4Q9H9V9 463 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 LRRC4BQ9NT99 713 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 RGSL1A5PLK6 1076 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 MATN2O00339 956 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 POLRMTO00411 1230 aaKnown RBP11.46□□□□□ -0.58
GCN1-201ENST00000300648 CYP2A6P11509 494 aaPredicted RBP11.46□□□□□ -0.58
GCN1-201ENST00000300648 TAF8Q7Z7C8 310 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 TMIEQ8NEW7 156 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 CDRT15Q96T59 188 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 TMEM121Q9BTD3 319 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 KCNH7Q9NS40 1196 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 GPR182O15218 404 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 MARC1Q5VT66 337 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 ABRAQ8N0Z2 381 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 SLC9A7Q96T83 725 aa11.46□□□□□ -0.58
GCN1-201ENST00000300648 NUDT17P0C025 328 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 DSG3P32926 999 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 ACTR3P61158 418 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 PEX5LQ8IYB4 626 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 STAG3L4Q8TBR4 150 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 OXCT2Q9BYC2 517 aaPredicted RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 COQ6Q9Y2Z9 468 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 ANKRD26Q9UPS8 1709 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 LOC100506127A0A0U1RQW1 187 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 UGT2B11O75310 529 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 LRG1P02750 347 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 ITGB3P05106 788 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 NR4A1P22736 598 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 SDC2P34741 201 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 DDX39BQ13838 428 aaKnown RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 SLC44A5Q8NCS7 719 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 SNX8Q9Y5X2 465 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 C1orf167Q5SNV9 1468 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 A0A096LPK6 155 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 LRIG2O94898 1065 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 STAU1O95793 577 aaKnown RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 SREBF1P36956 1147 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 CSHL1Q14406 222 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 CYP2A13Q16696 494 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 GMIPQ9P107 970 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 OPTCQ9UBM4 332 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 CKLFQ9UBR5 152 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 BARX2Q9UMQ3 279 aaPredicted RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 PCDHB7Q9Y5E2 793 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 STX16-NPEPL1H3BU86 382 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 STX16O14662 325 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 MAGEC1O60732 1142 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 TMCC2O75069 709 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 ERBB2P04626 1255 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 GLI1P08151 1106 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 SNRPB2P08579 225 aaKnown RBP11.45□□□□□ -0.58
GCN1-201ENST00000300648 HALP42357 657 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 FGD3Q5JSP0 725 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 ADGRF2Q8IZF7 708 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 SMYD1Q8NB12 490 aa11.45□□□□□ -0.58
GCN1-201ENST00000300648 PCSK9Q8NBP7 692 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms