RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 KLF8O95600 359 aaPredicted RBP10.19□□□□□ -0.78
LRTM1-201ENST00000273286 MYL1P05976 194 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 PI3P19957 117 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 SLC5A3P53794 718 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 YBX1P67809 324 aaKnown RBP10.19□□□□□ -0.78
LRTM1-201ENST00000273286 E2F5Q15329 346 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 SGSM1Q2NKQ1 1148 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 LY6G5CQ5SRR4 150 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 SHC4Q6S5L8 630 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 UNC93AQ86WB7 457 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 NELFCDQ8IXH7 590 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 CCDC33Q8N5R6 958 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 NAT16Q8N8M0 369 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 PARD3BQ8TEW8 1205 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 HPS3Q969F9 1004 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 MED10Q9BTT4 135 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 B3GNT5Q9BYG0 378 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 KRTAP4-9Q9BYQ8 210 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 CNTD2Q9H8S5 307 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 TLR8Q9NR97 1041 aaKnown RBP10.19□□□□□ -0.78
LRTM1-201ENST00000273286 SPHK2Q9NRA0 654 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 PLXND1Q9Y4D7 1925 aa10.19□□□□□ -0.78
LRTM1-201ENST00000273286 FAM208BQ5VWN6 2430 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 H0Y8X5 98 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 SGK1O00141 431 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 IKBKBO14920 756 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 POLR2DO15514 142 aaKnown RBP10.18□□□□□ -0.78
LRTM1-201ENST00000273286 MPOP05164 745 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 PROS1P07225 676 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 ZDHHC11BP0C7U3 371 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 RDXP35241 583 aaKnown RBP10.18□□□□□ -0.78
LRTM1-201ENST00000273286 RACK1P63244 317 aaKnown RBP10.18□□□□□ -0.78
LRTM1-201ENST00000273286 IFRD2Q12894 506 aaPredicted RBP10.18□□□□□ -0.78
LRTM1-201ENST00000273286 LAPTM5Q13571 262 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 TRIM61Q5EBN2 209 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 LYSMD4Q5XG99 296 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 SDE2Q6IQ49 451 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 TADA2BQ86TJ2 420 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 TTC30AQ86WT1 665 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 CEP57L1Q8IYX8 460 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 ZNF513Q8N8E2 541 aaPredicted RBP10.18□□□□□ -0.78
LRTM1-201ENST00000273286 TERB1Q8NA31 727 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 PIGKQ92643 395 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 SIGLEC10Q96LC7 697 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 XPO6Q96QU8 1125 aaKnown RBP10.18□□□□□ -0.78
LRTM1-201ENST00000273286 IMPG2Q9BZV3 1241 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 DPEP3Q9H4B8 488 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 CSNK1G1Q9HCP0 422 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 PNPLA8Q9NP80 782 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 TMEM30AQ9NV96 361 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 WDR35Q9P2L0 1181 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 IMPACTQ9P2X3 320 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 LSM7Q9UK45 103 aaKnown RBP10.18□□□□□ -0.78
LRTM1-201ENST00000273286 CFAP45Q9UL16 551 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 CHD6Q8TD26 2715 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 LAMA1P25391 3075 aa10.18□□□□□ -0.78
LRTM1-201ENST00000273286 TCRBV21S2A2A0A5A6 115 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 CLDN5O00501 218 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 PDXKO00764 312 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 CDX4O14627 284 aaPredicted RBP10.17□□□□□ -0.78
LRTM1-201ENST00000273286 TLR5O60602 858 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 TULP3O75386 442 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 TP53P04637 393 aaPredicted RBP10.17□□□□□ -0.78
LRTM1-201ENST00000273286 GSTM1P09488 218 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 BCKDHBP21953 392 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 ATP5C1P36542 298 aaKnown RBP10.17□□□□□ -0.78
LRTM1-201ENST00000273286 SLC6A11P48066 632 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 ZNF132P52740 706 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 ATXN3P54252 364 aaPredicted RBP10.17□□□□□ -0.78
LRTM1-201ENST00000273286 CACNA2D1P54289 1103 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 IRX4P78413 519 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 HNRNPDQ14103 355 aaKnown RBP10.17□□□□□ -0.78
LRTM1-201ENST00000273286 TCERG1LQ5VWI1 586 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 KLHDC10Q6PID8 442 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 UNQ6494/PRO21346Q6UXR6 183 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 HTR3DQ70Z44 454 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 CRYBG2Q8N1P7 616 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 HMGB4Q8WW32 186 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 JMJD8Q96S16 334 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 CDK5RAP1Q96SZ6 601 aaKnown RBP10.17□□□□□ -0.78
LRTM1-201ENST00000273286 KCNK16Q96T55 309 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 SLC39A2Q9NP94 309 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 CHORDC1Q9UHD1 332 aaPredicted RBP10.17□□□□□ -0.78
LRTM1-201ENST00000273286 INVSQ9Y283 1065 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 NME7Q9Y5B8 376 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 PCDHA5Q9Y5H7 936 aa10.17□□□□□ -0.78
LRTM1-201ENST00000273286 LRRIQ3A6PVS8 624 aaPredicted RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 H0Y626 953 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 NPC1O15118 1278 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 MAPK13O15264 365 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 CACNG3O60359 315 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 TRIM16O95361 564 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 C4BPAP04003 597 aaKnown RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 HOXB2P14652 356 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 NTSR1P30989 418 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ME1P48163 572 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 KDSRQ06136 332 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 GFPT1Q06210 699 aaPredicted RBP10.16□□□□□ -0.78
LRTM1-201ENST00000273286 ENPEPQ07075 957 aa10.16□□□□□ -0.78
LRTM1-201ENST00000273286 DUOXA1Q1HG43 343 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms