RNA–Protein interactions for RNA: ENST00000264638.8

CNTNAP1-201, Transcript of contactin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP1, Length 5,276 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-201ENST00000264638 CAMKK2Q96RR4 588 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 GRIP2Q9C0E4 1043 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 CDT1Q9H211 546 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 GPAMQ9HCL2 828 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 SMPD4Q9NXE4 827 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 ABLIM1O14639 778 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 ALADP13716 330 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 ITGB5P18084 799 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 ZNF844Q08AG5 666 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 CAPSQ13938 189 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 PRAMEF19Q5SWL8 479 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 WDR59Q6PJI9 974 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 LGI2Q8N0V4 545 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 LPCAT1Q8NF37 534 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 S100ZQ8WXG8 99 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 WNT8BQ93098 351 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 NARS2Q96I59 477 aaKnown RBP13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 RERGLQ9H628 205 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 CRNNQ9UBG3 495 aaPredicted RBP13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 COL1A2P08123 1366 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 CD3EAPO15446 510 aaKnown RBP13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 CHI3L1P36222 383 aaPredicted RBP13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 ATP5C1P36542 298 aaKnown RBP13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 GALNTL6Q49A17 601 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 TMC3Q7Z5M5 1100 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 MTMR8Q96EF0 704 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 APOPT1Q96IL0 206 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 GORASP1Q9BQQ3 440 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 CHID1Q9BWS9 393 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 ZCWPW1Q9H0M4 648 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 RMI1Q9H9A7 625 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 WDR41Q9HAD4 459 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 TRIM39Q9HCM9 518 aa13.54□□□□□ -0.24
CNTNAP1-201ENST00000264638 E5RJQ4 531 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 PRKAR2AP13861 404 aaKnown RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 HOXB8P17481 243 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 WEE1P30291 646 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 MIPP30301 263 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 SLC1A6P48664 564 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 PPP3CAQ08209 521 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 SLC45A4Q5BKX6 768 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 FOXR2Q6PJQ5 311 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 NT5DC3Q86UY8 548 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 MSL3Q8N5Y2 521 aaKnown RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 DNAJC19Q96DA6 116 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 MARCH2Q9P0N8 246 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 AP3M1Q9Y2T2 418 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 GIT1Q9Y2X7 761 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 EFCAB10A6NFE3 127 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 AMPD1P23109 780 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 JAK1P23458 1154 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 FLT3P36888 993 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 NET1Q7Z628 596 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 TFAP2DQ7Z6R9 452 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 KRT77Q7Z794 578 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 ETNPPLQ8TBG4 499 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 COPS7BQ9H9Q2 264 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 EURLQ9NYK6 297 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 TRIM43BA6NCK2 446 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 FGF10O15520 208 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 MTRF1O75570 445 aaKnown RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 ALOX5P09917 674 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 TPBGLP0DKB5 382 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 S100A1P23297 94 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 WARSP23381 471 aaKnown RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 CD151P48509 253 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 CENPAP49450 140 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 POLR2LP62875 67 aaKnown RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 MEA1Q16626 185 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 DUSP28Q4G0W2 176 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 WSCD1Q658N2 575 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 FAM180AQ6UWF9 173 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 IFRD1O00458 451 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 ZNF7P17097 686 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 ATP12AP54707 1039 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 FCHO2Q0JRZ9 810 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 MAD2L1Q13257 205 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 TCHHL1Q5QJ38 904 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 CAMK1DQ8IU85 385 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 EPHX4Q8IUS5 362 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 INPP4AQ96PE3 977 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 NUAK2Q9H093 628 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 ATXN10Q9UBB4 475 aa13.53□□□□□ -0.24
CNTNAP1-201ENST00000264638 APOC4-APOC2K7ER74 178 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 STX11O75558 287 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 APOC2P02655 101 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 CYP2A6P11509 494 aaPredicted RBP13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 NPR3P17342 541 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 ITGAXP20702 1163 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 TGM3Q08188 693 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 SPIRE1Q08AE8 756 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 ITGB3BPQ13352 177 aaPredicted RBP13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 RIPOR1Q6ZS17 1223 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 PPTC7Q8NI37 304 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 LENG1Q96BZ8 264 aaPredicted RBP13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 TMEM237Q96Q45 408 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 SEMA4AQ9H3S1 761 aa13.52□□□□□ -0.24
CNTNAP1-201ENST00000264638 HPS4Q9NQG7 708 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms