RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 DGKDQ16760 1214 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 SYPL2Q5VXT5 272 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 C4orf22Q6V702 233 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 TIFABQ6ZNK6 161 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 SLC7A14Q8TBB6 771 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 CNBD2Q96M20 576 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 COPS7BQ9H9Q2 264 aaPredicted RBP14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 MKS1Q9NXB0 559 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 TLK1Q9UKI8 766 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 VANGL2Q9ULK5 521 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 CDY2AQ9Y6F7 541 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 CDY1Q9Y6F8 540 aa14.77□□□□□ -0.05
SFSWAP-201ENST00000261674 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 DPYSL4O14531 572 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 CDK7P50613 346 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 MSLNQ13421 630 aaPredicted RBP14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 BEST2Q8NFU1 509 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 ACMSDQ8TDX5 336 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 SREK1Q8WXA9 508 aaKnown RBP14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 OSMRQ99650 979 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 OMDQ99983 421 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 GATA5Q9BWX5 397 aaPredicted RBP14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 SPATA16Q9BXB7 569 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 VCX3BQ9H321 246 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 SORCS3Q9UPU3 1222 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 SNX10Q9Y5X0 201 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 LOC285556D6RIA3 1793 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 TREHO43280 583 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 BCAT1P54687 386 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 DEUP1Q05D60 604 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 PDK1Q15118 436 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 ACTRT2Q8TDY3 377 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 DNAJB3Q8WWF6 145 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 CELF6Q96J87 481 aaKnown RBP14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 LRGUKQ96M69 825 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 TSNARE1Q96NA8 513 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 BEGAINQ9BUH8 593 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 VRTNQ9H8Y1 702 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 NMRAL1Q9HBL8 299 aa14.76□□□□□ -0.05
SFSWAP-201ENST00000261674 FAM72CH0Y354 149 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 TRIM13O60858 407 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 FLOT2Q14254 428 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 FAM72AQ5TYM5 149 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 FAM72DQ6L9T8 149 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 AAGABQ6PD74 315 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 SLC26A9Q7LBE3 791 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 FAM72BQ86X60 149 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 APLFQ8IW19 511 aaPredicted RBP14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 ANKRD52Q8NB46 1076 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 ZSCAN18Q8TBC5 510 aaPredicted RBP14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 URGCPQ8TCY9 931 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 CCNT2O60583 730 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 PIGNO95427 931 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 PRKCGP05129 697 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 ALDH1A3P47895 512 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 ZNF460Q14592 562 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 USP10Q14694 798 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 GRIK4Q16099 956 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 FSCN1Q16658 493 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 PKDCCQ504Y2 493 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 HFE2Q6ZVN8 426 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 SPATA24Q86W54 205 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 RNF135Q8IUD6 432 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 KCNK16Q96T55 309 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 ILKAPQ9H0C8 392 aaPredicted RBP14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 CDH19Q9H159 772 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 DDX43Q9NXZ2 648 aaKnown RBP14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 PMLP29590 882 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 PTPN9P43378 593 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 SLC26A2P50443 739 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 MPP3Q13368 585 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 ART3Q13508 389 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 MTHFD1LQ6UB35 978 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 ACAD11Q709F0 780 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 SIX6OS1Q8N1H7 587 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 SNX31Q8N9S9 440 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 PPTC7Q8NI37 304 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 RCN3Q96D15 328 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 LRRC40Q9H9A6 602 aa14.75□□□□□ -0.05
SFSWAP-201ENST00000261674 hCG_2014768A0A024R1R8 64 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 ZBTB24O43167 697 aaPredicted RBP14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 RECQL4O94761 1208 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 MT-CO1P00395 513 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 ERCC2P18074 760 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 NUMBP49757 651 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 ZNF484Q5JVG2 852 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 FBXO47Q5MNV8 452 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 MFSD14CQ5VZR4 134 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 CPNE1Q99829 537 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 FAM192AQ9GZU8 254 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 PCDHGB4Q9UN71 923 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 RUVBL2Q9Y230 463 aaKnown RBP14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 PCDHGB5Q9Y5G0 923 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 TIMM13Q9Y5L4 95 aaPredicted RBP14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 SPTLC1O15269 473 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 BEST1O76090 585 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 ALDH1A2O94788 518 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 JCHAINP01591 159 aa14.74□□□□□ -0.05
SFSWAP-201ENST00000261674 XRCC1P18887 633 aaPredicted RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms