RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CCR1P32246 355 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 CXCR3P49682 368 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 KLC1Q07866 573 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 AP1ARQ63HQ0 302 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 STRA8Q7Z7C7 330 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 MCUR1Q96AQ8 359 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 APOPT1Q96IL0 206 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 NVLO15381 856 aaKnown RBP14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 WFS1O76024 890 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 CNTN5O94779 1100 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 POLBP06746 335 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 PIRTP0C851 137 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 HOXD10P28358 340 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 TSNAXIP1Q2TAA8 658 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 SNX30Q5VWJ9 437 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 KIAA1841Q6NSI8 718 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 TAS1R1Q7RTX1 841 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 FBXO27Q8NI29 283 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 NRG4Q8WWG1 115 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 FSD1LQ9BXM9 530 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 PAPOLBQ9NRJ5 636 aaKnown RBP14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 PCDHA11Q9Y5I1 949 aa14.93□□□□□ -0.02
TRAFD1-201ENST00000257604 PRPF4O43172 522 aaKnown RBP eCLIP14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 ZNF623O75123 536 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 ATP5HO75947 161 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 USP1O94782 785 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 ETS2P15036 469 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 FDFT1P37268 417 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 GARSP41250 739 aaKnown RBP14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 TAF10Q12962 218 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 CTBP1Q13363 440 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SEMA5AQ13591 1074 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SLC30A9Q6PML9 568 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SCD5Q86SK9 330 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 EFCAB3Q8N7B9 438 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 PAF1Q8N7H5 531 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SGF29Q96ES7 293 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 TTC1Q99614 292 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 FICDQ9BVA6 458 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SLC39A8Q9C0K1 460 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 NT5MQ9NPB1 228 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 KANSL3Q9P2N6 904 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SLC39A10Q9ULF5 831 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 ACTL7BQ9Y614 415 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SLC12A8A0AV02 714 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 GJB3O75712 270 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 F9P00740 461 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 PTPN4P29074 926 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 CD68P34810 354 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 TAF12Q16514 161 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 ACSBG2Q5FVE4 666 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 N4BP2L1Q5TBK1 243 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 LRRC8DQ7L1W4 858 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 ZNF513Q8N8E2 541 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SCG3Q8WXD2 468 aaKnown RBP14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SH3GL3Q99963 347 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 SPON2Q9BUD6 331 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 FIS1Q9Y3D6 152 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 ACTL7AQ9Y615 435 aa14.92□□□□□ -0.02
TRAFD1-201ENST00000257604 GYG2O15488 501 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 PHGDHO43175 533 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 ALDH2P05091 517 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 SPATA31D3P0C874 917 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 NMBRP28336 390 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 SERPINB6P35237 376 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 RASSF2P50749 326 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 KDSRQ06136 332 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 ZNF460Q14592 562 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 SPATA31D4Q6ZUB0 917 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 LIMS2Q7Z4I7 341 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 MRPL10Q7Z7H8 261 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.91□□□□□ -0.022e-7■■■■■ 102.3
TRAFD1-201ENST00000257604 INPP5DQ92835 1189 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 NT5C3BQ969T7 300 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 OXNAD1Q96HP4 312 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 SUSD3Q96L08 255 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 RPRD1AQ96P16 312 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 MYL2P10916 166 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 CALRP27797 417 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 CYP2C18P33260 490 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 ARFIP2P53365 341 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 BST1Q10588 318 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 THOC5Q13769 683 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 DSC3Q14574 896 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 CCSAPQ6IQ19 270 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 BHLHA9Q7RTU4 235 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 PSTKQ8IV42 348 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 CNTD1Q8N815 330 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 ACVR1CQ8NER5 493 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 MZB1Q8WU39 189 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 TRIM55Q9BYV6 548 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 FAM124BQ9H5Z6 455 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 SMPD4Q9NXE4 827 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 CDY1Q9Y6F8 540 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 SCN10AQ9Y5Y9 1956 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 RFPL1O75677 317 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 VAPBO95292 243 aa14.91□□□□□ -0.02
TRAFD1-201ENST00000257604 SP100P23497 879 aaPredicted RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms