RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Gm21962L7N280 338 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Trappc9Q3U0M1 1148 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Nuak1Q641K5 658 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Defa-rs10Q64263 91 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cox8aQ64445 69 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Nlrp4eQ66X19 978 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Slc39a4Q78IQ7 660 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Hmgxb4Q80Y32 594 aaKnown RBP21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Chmp2bQ8BJF9 213 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Cacnb2Q8CC27 655 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Sik2Q8CFH6 931 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 MgarpQ8VI64 283 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 NelfcdQ922L6 591 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Hddc3Q9D114 179 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Neu2Q9JMH3 379 aa21.64■■□□□ 1.06
Ccdc88a-202ENSMUST00000109477 Tmem215A7E1Z1 235 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 SmgcF6VRN1 385 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ifi206G3UZV2 921 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Sdc4O35988 198 aaKnown RBP21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Elk3P41971 409 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 SftpbP50405 377 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Sap25Q1EHW4 186 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Six4Q61321 775 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Birc2Q62210 612 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ric8bQ80XE1 520 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ppp1r15bQ8BFW3 697 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Robo4Q8C310 1012 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Brd8Q8R3B7 951 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Setd7Q8VHL1 366 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Dlg2Q91XM9 852 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Tas1r2Q925I4 843 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Smg9Q9DB90 520 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gm28510A0A087WP28 240 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Olfr271-ps1A0A1L1SQH2 283 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Fam171a2A2A699 822 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Mapkapk2P49138 386 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 PhbP67778 272 aaKnown RBP21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Naaladl1Q7M758 745 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Znf365Q8BG89 408 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Tmem120aQ8C1E7 343 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ipo11Q8K2V6 975 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Camkk1Q8VBY2 505 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Emid1Q91VF5 444 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Tdrd12Q9CWU0 1215 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 TarsQ9D0R2 722 aaKnown RBP21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Q9D979 236 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Nme3Q9WV85 169 aa21.63■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Cdh23Q99PF4 3354 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Cep290Q6A078 2472 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Sh3pxd2bA2AAY5 908 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Lekr1B2RVN1 116 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gm3424L7N298 263 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gm8246M0QWX9 263 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Atp2a2O55143 1044 aaKnown RBP21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 MaptP10637 733 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Rag1P15919 1040 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Tubgcp3P58854 905 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Itga4Q00651 1039 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gpr19Q61121 415 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Olfm2Q8BM13 448 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Scara3Q8C850 606 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ago1Q8CJG1 857 aaKnown RBP21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Mfsd5Q921Y4 450 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Trim66Q924W6 1242 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Anks3Q9CZK6 655 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Pus10Q9D3U0 527 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 PrebQ9WUQ2 417 aa21.62■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Psma3O70435 255 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Sstr1P30873 391 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ptpn1P35821 432 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 BtkP35991 659 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ccna2P51943 422 aaKnown RBP21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 StacP97306 403 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Alkbh5Q3TSG4 395 aaKnown RBP21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Foxr1Q3UTB7 268 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Fam189bQ5HZJ5 669 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ticam2Q8BJQ4 232 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ano4Q8C5H1 955 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Nudt8Q9CR24 210 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 1700013H16RikQ9DAC5 291 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 XkQ9QXY7 446 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Pla2g2fQ9QZT4 168 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 TfebQ9R210 475 aa21.61■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gm11758A2BEI6 360 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Gm11757A2BEI8 360 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Dusp8O09112 663 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ca8P28651 291 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Atxn10P28658 475 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 E2f2P56931 443 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Cdh6P97326 790 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 HrQ61645 1182 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Rimbp2Q80U40 1072 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Cnot10Q8BH15 744 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Tmtc3Q8BRH0 920 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Abhd8Q8R0P8 439 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Agap3Q8VHH5 910 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Sike1Q9CPR7 207 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 DtnaQ9D2N4 746 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 Ephx1Q9D379 455 aa21.6■■□□□ 1.05
Ccdc88a-202ENSMUST00000109477 ApipQ9WVQ5 241 aa21.6■■□□□ 1.05
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms