RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ubtfl1Q3USZ2 394 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Lrrc75bQ7TPD7 306 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc41a1Q8BJA2 512 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 SynpoQ8CC35 929 aaKnown RBP14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 PolbQ8K409 335 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tmprss4Q8VCA5 435 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ssxb1Q9CPU1 170 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cby3Q9CVN6 235 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gtf3c6Q9D8P7 227 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ddi1Q9DAF3 408 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Dip2cE9PWR4 1557 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Mtx3D3YTP3 312 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr600E9PUN7 314 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gpsm1Q6IR34 673 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Senp5Q6NXL6 749 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Fam126aQ6P9N1 521 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Acad9Q8JZN5 625 aaKnown RBP14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Kremen1Q99N43 473 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Snrpb2Q9CQI7 225 aaKnown RBP14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 RhouQ9EQT3 261 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Clca3bE9PUL3 1044 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Vmn2r100E9QAZ9 850 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm3278L7N2D2 218 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Nfatc2ipO09130 412 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Psd2Q6P1I6 770 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Igdcc3Q8BQC3 813 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Phc3Q8CHP6 981 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Snapc1Q8K0S9 389 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ttc39cQ8VE09 580 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Pcdhga10Q91XY9 930 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 MtpapQ9D0D3 585 aaKnown RBP14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Sept12Q9D451 317 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 RptorQ8K4Q0 1335 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Muc1Q02496 630 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 SpidrQ8BGX7 933 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Zcchc12Q9CZA5 402 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Haus5Q9D786 619 aa14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ahdc1Q6PAL7 1594 aaKnown RBP14.18□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ddi2A2ADY9 399 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Krt28A6BLY7 462 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ptchd4B9EKX1 904 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Bmp2P21274 394 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 TubP50586 505 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 VclQ64727 1066 aaKnown RBP14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Rapgefl1Q68EF8 662 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 UnkQ8BL48 810 aaKnown RBP14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ckap4Q8BMK4 575 aaKnown RBP14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 3830417A13RikQ8BQJ2 303 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 BsndQ8VIM4 307 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Snapc2Q91XA5 359 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Nudt14Q9D142 222 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 AcadsbQ9DBL1 432 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cyb561d2Q9WUE3 222 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr521E9Q519 321 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Etv6P97360 485 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 PostnQ62009 838 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Chst10Q6PGK7 356 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ptpn7Q8BUM3 359 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 BroxQ8K2Q7 411 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Spag16Q8K450 639 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Bhmt2Q91WS4 363 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Dqx1Q924H9 718 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tdrd1Q99MV1 1172 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Scd3Q99PL7 359 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Cdc42P60766 191 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Psmb4P99026 264 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Nat8lQ3UGX3 299 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Oog3Q3UWY1 500 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Dsg1bQ7TSF1 1060 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ttc24Q8BYG0 334 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Wdr11Q8K1X1 1223 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Olfr449Q8VGW8 311 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Caskin2Q8VHK1 1201 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Lrrc40Q9CRC8 602 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Duoxa2Q9D311 320 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Efcab1Q9D3N2 212 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ak1Q9R0Y5 194 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Epm2aQ9WUA5 330 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Dip2aQ8BWT5 1523 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm3147A0A0J9YU88 481 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm10424A0A0J9YVD0 481 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm35911A0A1D5RLS7 214 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ttll8A4Q9F1 832 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ccnb1ip1D3Z3K2 276 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm7971J3QMM8 481 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Slc16a8O35308 492 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Hmgcs2P54869 508 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Usp46P62069 366 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Hpcal1P62748 193 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 LbpQ61805 481 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 PstkQ8BP74 359 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Man2a2Q8BRK9 1152 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 DolkQ8R2Y3 534 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Tsen15Q8R3W5 168 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Epn3Q91W69 636 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Stard13Q923Q2 1113 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Ilf2Q9CXY6 390 aaKnown RBP14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Asap1Q9QWY8 1147 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Klrc2Q9WTJ9 238 aa14.17□□□□□ -0.14
Col3a1-201ENSMUST00000087883 Gm45233A0A0N4SVE0 221 aa14.17□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 21 ms