RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Tnks2Q3UES3 1166 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Elavl4Q61701 385 aaKnown RBP7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Arhgap30Q640N3 1101 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Kiaa0895Q7TQE7 519 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Alkbh8Q80Y20 664 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tusc3Q8BTV1 347 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 RtknQ8C6B2 564 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 CatsperzQ9CQP8 194 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Anks3Q9CZK6 655 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mzb1Q9D8I1 188 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 AuhQ9JLZ3 314 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Trpc4Q9QUQ5 974 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dnajc7Q9QYI3 494 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nme3Q9WV85 169 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Sgk1Q9WVC6 431 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Kmt2eQ3UG20 1868 aa7.05□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lilra6A0A0B4J1F3 663 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Apol7bB1AQP7 369 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Apold1E9Q0X2 246 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm6121L7MUF1 212 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mmp15O54732 657 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 ItgavP43406 1044 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nr2c2P49117 596 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Atp5bP56480 529 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Arl1P61211 181 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lhx5P61375 402 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Stx2Q00262 289 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Flt3Q00342 1000 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 GmncQ3URY2 333 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Apol7eQ3UZ24 369 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 ChukQ60680 745 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tcf4Q60722 670 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rhot1Q8BG51 631 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Krt75Q8BGZ7 551 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gm6377Q8BHV4 303 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ago1Q8CJG1 857 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ccdc137Q8R0K4 290 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Hid1Q8R1F6 788 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Masp2Q91WP0 685 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dr1Q91WV0 176 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 GzmnQ920S1 248 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dnajb1Q9QYJ3 340 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Angptl3Q9R182 455 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rev3lQ61493 3122 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rpl9-ps6A0A140T8T4 192 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Tex13aA2AFS9 377 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Atf6F6VAN0 656 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nfatc2ipO09130 412 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 CenpaO35216 134 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zfy2P20662 777 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rpl9P51410 192 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dbx1P52950 335 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Hddc2Q3SXD3 199 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cnga4Q3UW12 575 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Fam167aQ6P1G6 215 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cand2Q6ZQ73 1235 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nup54Q8BTS4 510 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 MtrrQ8C1A3 696 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Acsl5Q8JZR0 683 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ugt3a2Q8JZZ0 523 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zbtb6Q8K088 423 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 FgbQ8K0E8 481 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mrpl38Q8K2M0 380 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Slc8a2Q8K596 921 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Nudcd3Q8R1N4 363 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lrrc8cQ8R502 803 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dhcr24Q8VCH6 516 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ttc39cQ8VE09 580 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 AjubaQ91XC0 547 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Chchd3Q9CRB9 227 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Dbndd2Q9CRD4 158 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Olfr706Q9EPF8 316 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Arhgef10Q8C033 1345 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lrrc74aA0A1Y7VMD6 494 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Znf518bB2RRE4 1077 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Zfp384E9Q1A5 584 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ttc7bE9Q6P5 843 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 LgmnO89017 435 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 HdcP23738 662 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ptpn1P35821 432 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Hspa4lP48722 838 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gdi1P50396 447 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 SpertQ32MG2 446 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mat2aQ3THS6 395 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Trmt10cQ3UFY8 414 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ugt3a1Q3UP75 523 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Lemd2Q6DVA0 511 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 CslQ80X68 466 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gatad2aQ8CHY6 629 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Ugp2Q91ZJ5 508 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mlf2Q99KX1 247 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Mphosph6Q9D1Q1 161 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Noa1Q9JJG9 693 aaKnown RBP7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Rps6kb2Q9Z1M4 485 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Gprin2D3Z1D7 455 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Enthd1E9Q1Z2 618 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Smpdl3bP58242 456 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Cntn5P68500 1098 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Uhmk1P97343 419 aa7.04□□□□□ -1.28
Bdnf-201ENSMUST00000053317 Klhl14Q69ZK5 630 aa7.04□□□□□ -1.28
Retrieved 100 of 22,080 RNA–protein pairs in 23.3 ms