RNA–Protein interactions for RNA: ENSMUST00000027367.13

Ctdsp1-201, Transcript of Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdsp1, Length 2,876 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1-201ENSMUST00000027367 Lin52Q8CD94 116 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Npffr2Q924H0 417 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Oma1Q9D8H7 521 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 IcmtQ9EQK7 283 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Rsc1a1Q9ER99 582 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 PtprfA2A8L5 1898 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Ifi206G3UZV2 921 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Slc11a2P49282 568 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Cdh9P70407 786 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Ikzf1Q03267 517 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Grm5Q3UVX5 1203 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Msi1Q61474 362 aaKnown RBP20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Dnajc1Q61712 552 aaKnown RBP20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Kiaa1841Q68FF0 718 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Rasa4Q6PFQ7 802 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Slco2b1Q8BXB6 683 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Pcolce2Q8R4W6 414 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Wrnip1Q91XU0 660 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Mxra7Q9CZH7 178 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Olfr711Q9EPG2 314 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Rhox3fA2ANE1 215 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Smok3aC0HKC8 504 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Smok3bC0HKC9 504 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Grip2G3XA20 1042 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Rab17P35292 214 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Ptger1P35375 405 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Q14AM7 275 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Spag6Q3V0U9 509 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Cage1Q5IR70 849 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 GnasQ6R0H7 1133 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 ClmpQ8R373 373 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Sytl2Q99N50 950 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Abcg3Q99P81 650 aa20.56■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 9330159F19RikD3Z623 648 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Phkg1P07934 388 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Itm2aQ61500 263 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Sh3rf1Q69ZI1 892 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 DstykQ6XUX1 927 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Abcg2Q7TMS5 657 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Scara3Q8C850 606 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 CtbsQ8R242 366 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Reep3Q99KK1 254 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Dnajb4Q9D832 337 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 PllpQ9DCU2 182 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Ddx21Q9JIK5 851 aaKnown RBP20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 NbnQ9R207 751 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Gm13212B1ASQ7 799 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Cdh16O88338 830 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Myl4P09541 193 aaKnown RBP20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 ZfaP23607 742 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Htr2cP34968 459 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 GlrbP48168 496 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Gabpb1Q00420 383 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 DbhQ64237 622 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 MyorgQ69ZQ1 716 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Olfr533Q7TRT7 320 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Zswim3Q8CFL8 695 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 PvrQ8K094 408 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 HpdlQ8K248 371 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Nde1Q9CZA6 344 aa20.55■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Supt3B0QZW4 406 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Calhm3J3QMI4 347 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 NumblO08919 604 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Mthfd1lQ3V3R1 977 aaKnown RBP20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Trcg1Q58Y74 825 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Gpr65Q61038 337 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 ClmnQ8C5W0 1052 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Ccdc63Q8CDV6 558 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Cybrd1Q925G2 290 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Actrt1Q9D9J3 376 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Subh2bvQ9D9Z7 123 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Pgam1Q9DBJ1 254 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Xpnpep3B7ZMP1 506 aaKnown RBP20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Exoc7O35250 697 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Ppm1aP49443 382 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Pacs2Q3V3Q7 862 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 MroQ7TNB4 248 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Fbxo21Q8VDH1 627 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 MmadhcQ99LS1 296 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 AadacQ99PG0 398 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Rin2Q9D684 903 aa20.54■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Vmn2r72D3Z4N8 856 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Spata31E9QAF0 1014 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Acvr2bP27040 536 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Asgr1P34927 284 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 E330034G19RikQ3UWX6 351 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 P3h1Q3V1T4 739 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Fam107aQ78TU8 144 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Nlrp4bQ8C6J9 863 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Otud7aQ8R554 926 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Pglyrp2Q8VCS0 530 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Smim14Q91VT8 99 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Atg2aQ6P4T0 1914 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Btbd35f15A0A087WR44 498 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Btbd35f12A0A0A0MQP3 498 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Igkv5-45A0A0B4J1J1 115 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Btbd35f9A2BFZ7 498 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Btbd35f7A2BHG6 498 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Btbd35f19A2CG71 498 aa20.53■□□□□ 0.88
Ctdsp1-201ENSMUST00000027367 Btbd35f10A2CG92 498 aa20.53■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms