RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 EPHX1P07099 455 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PDGFRAP16234 1089 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 GPD1P21695 349 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 COMTP21964 271 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PSMA2P25787 234 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 YWHAQP27348 245 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 OAS2P29728 719 aaKnown RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 CHKAP35790 457 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 MATKP42679 507 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 ALDH1A3P47895 512 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 CLCN4P51793 760 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PIGHQ14442 188 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PLA2G4EQ3MJ16 856 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 BSPRYQ5W0U4 402 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PEX26Q7Z412 305 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 KREMEN2Q8NCW0 462 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 KIF18AQ8NI77 898 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PPP1R14AQ96A00 147 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 TBC1D20Q96BZ9 403 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 NAPGQ99747 312 aaPredicted RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 DDX23Q9BUQ8 820 aaKnown RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 TTLL2Q9BWV7 592 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 TLR10Q9BXR5 811 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 WDR12Q9GZL7 423 aaKnown RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 LMAN2LQ9H0V9 348 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 POPDC2Q9HBU9 364 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 COMMD8Q9NX08 183 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PCDHGA9Q9Y5G4 932 aaKnown RBP8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PCDHGA8Q9Y5G5 932 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PCDHGA7Q9Y5G6 932 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PCDHGA6Q9Y5G7 932 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PCDHGA3Q9Y5H0 932 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 PCDHGA2Q9Y5H1 932 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 MRFAP1Q9Y605 127 aa8.26□□□□□ -1.09
SCARB2-220ENST00000640076 NCK2O43639 380 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 SPOPO43791 374 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 CLASP2O75122 1294 aaKnown RBP8.25□□□□□ -1.09
SCARB2-220ENST00000640076 ULK1O75385 1050 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 C1RP00736 705 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 HRGP04196 525 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 ATP1A1P05023 1023 aaKnown RBP8.25□□□□□ -1.09
SCARB2-220ENST00000640076 HMGA1P17096 107 aaKnown RBP8.25□□□□□ -1.09
SCARB2-220ENST00000640076 HOXC13P31276 330 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 SDC4P31431 198 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 SLC1A1P43005 524 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 PGFP49763 221 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 YWHAGP61981 247 aaKnown RBP eCLIP8.25□□□□□ -1.09
SCARB2-220ENST00000640076 TWF1Q12792 350 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 IFT88Q13099 833 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 CCDC14Q49A88 953 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 DCAF6Q58WW2 860 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 DAB2IPQ5VWQ8 1189 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 SYPL2Q5VXT5 272 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 BEND5Q7L4P6 421 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 SCD5Q86SK9 330 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 MON1AQ86VX9 555 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 DEFB106AQ8N104 65 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 OR8H2Q8N162 312 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 CD101Q93033 1021 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 NT5C3BQ969T7 300 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 HES6Q96HZ4 224 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 CFAP57Q96MR6 1250 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 TRIM62Q9BVG3 475 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 RNF38Q9H0F5 515 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 NMUR1Q9HB89 426 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 MKS1Q9NXB0 559 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.25□□□□□ -1.09
SCARB2-220ENST00000640076 AMFRQ9UKV5 643 aa8.25□□□□□ -1.09
SCARB2-220ENST00000640076 PACSIN2Q9UNF0 486 aaPredicted RBP8.25□□□□□ -1.09
SCARB2-220ENST00000640076 PRRC2BQ5JSZ5 2229 aaKnown RBP8.25□□□□□ -1.09
SCARB2-220ENST00000640076 A0A1W2PPC1 479 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 TBX1O43435 398 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 LRCH4O75427 683 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 C8AP07357 584 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CSH1P0DML2 217 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CSH2P0DML3 217 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 PTPN9P43378 593 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 EPHB3P54753 998 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 ATP11AP98196 1134 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 TAF10Q12962 218 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 VEPH1Q14D04 833 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 ACAP1Q15027 740 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 C15orf59Q2T9L4 293 aaPredicted RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 LRIT3Q3SXY7 679 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 SLC25A52Q3SY17 297 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 DNTTIP2Q5QJE6 756 aaKnown RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 INTS11Q5TA45 600 aaKnown RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 PAPD7Q5XG87 772 aaKnown RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CCDC149Q6ZUS6 474 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 ADGRD2Q7Z7M1 963 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 PDZD3Q86UT5 571 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 ARFGAP1Q8N6T3 406 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 SLC22A17Q8WUG5 538 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CENPIQ92674 756 aaPredicted RBP8.24□□□□□ -1.09
SCARB2-220ENST00000640076 FBXO32Q969P5 355 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 MYRFLQ96LU7 910 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 NPY6RQ99463 290 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 CACNA2D2Q9NY47 1150 aa8.24□□□□□ -1.09
SCARB2-220ENST00000640076 EHD2Q9NZN4 543 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms