RNA–Protein interactions for RNA: ENST00000635227.1

LINC01108-202, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 3 BASIC

Gene LINC01108, Length 776 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-202ENST00000635227 TFAP2BQ92481 460 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 TRIM43Q96BQ3 446 aaPredicted RBP7.76□□□□□ -1.17
LINC01108-202ENST00000635227 CALML4Q96GE6 196 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 SARGQ9BW04 601 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 SERHLQ9NQF3 203 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 GEMIN8Q9NWZ8 242 aaKnown RBP7.76□□□□□ -1.17
LINC01108-202ENST00000635227 MTMR4Q9NYA4 1195 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 COL20A1Q9P218 1284 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 AFF4Q9UHB7 1163 aaKnown RBP7.76□□□□□ -1.17
LINC01108-202ENST00000635227 TBC1D30Q9Y2I9 924 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 MRPS17Q9Y2R5 130 aaKnown RBP7.76□□□□□ -1.17
LINC01108-202ENST00000635227 PAXBP1Q9Y5B6 917 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 COL4A5P29400 1685 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 MUC6Q6W4X9 2439 aa7.76□□□□□ -1.17
LINC01108-202ENST00000635227 SMCO2A6NFE2 343 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 SMIM22K7EJ46 135 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 MPHOSPH10O00566 681 aaKnown RBP7.75□□□□□ -1.17
LINC01108-202ENST00000635227 PPM1DO15297 605 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 RHOBTB3O94955 611 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 PDHBP11177 359 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 SKILP12757 684 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 GCFC2P16383 781 aaKnown RBP7.75□□□□□ -1.17
LINC01108-202ENST00000635227 MRPL12P52815 198 aaKnown RBP7.75□□□□□ -1.17
LINC01108-202ENST00000635227 WNT3P56703 355 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 MRPS35P82673 323 aaKnown RBP7.75□□□□□ -1.17
LINC01108-202ENST00000635227 GABPAQ06546 454 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 TRIM14Q14142 442 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 CCDC96Q2M329 555 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 COBLL1Q53SF7 1204 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 SPECC1Q5M775 1068 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 ARHGAP40Q5TG30 622 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 SPATA1Q5VX52 437 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 RRAGBQ5VZM2 374 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 CDC42EP5Q6NZY7 148 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 CUL5Q93034 780 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 NMD3Q96D46 503 aaKnown RBP7.75□□□□□ -1.17
LINC01108-202ENST00000635227 PAGE5Q96GU1 130 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 ZNF830Q96NB3 372 aaPredicted RBP7.75□□□□□ -1.17
LINC01108-202ENST00000635227 PTDSS2Q9BVG9 487 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 IDI2Q9BXS1 227 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 CCSER1Q9C0I3 900 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 VPS33BQ9H267 617 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 RIOX1Q9H6W3 641 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 PI4KBQ9UBF8 816 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 SERTAD3Q9UJW9 196 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 SHOC2Q9UQ13 582 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 SSX2IPQ9Y2D8 614 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 ADGRA2Q96PE1 1338 aa7.75□□□□□ -1.17
LINC01108-202ENST00000635227 IGKV6D-41A0A0C4DH26 115 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 BICDL2A1A5D9 508 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 ADM5C9JUS6 153 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 MPPED1O15442 326 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 ZSCAN12O43309 604 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 PQBP1O60828 265 aaKnown RBP7.74□□□□□ -1.17
LINC01108-202ENST00000635227 ENTPD3O75355 529 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 SNHG28P0DPA3 235 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 CYP2C9P11712 490 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 MMP14P50281 582 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 NXPH1P58417 271 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 RPS16P62249 146 aaKnown RBP7.74□□□□□ -1.17
LINC01108-202ENST00000635227 SP2Q02086 613 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 ZNF543Q08ER8 600 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 KCNB1Q14721 858 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 ZNF169Q14929 603 aaPredicted RBP7.74□□□□□ -1.17
LINC01108-202ENST00000635227 PTPRRQ15256 657 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 PTPN14Q15678 1187 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 SLC44A4Q53GD3 710 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 ZNF658Q5TYW1 1059 aaPredicted RBP7.74□□□□□ -1.17
LINC01108-202ENST00000635227 TMEM179Q6ZVK1 233 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 FOXP4Q8IVH2 680 aaPredicted RBP7.74□□□□□ -1.17
LINC01108-202ENST00000635227 VSTM4Q8IW00 320 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 FAM114A1Q8IWE2 563 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 ACTRT2Q8TDY3 377 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 NOC3LQ8WTT2 800 aaKnown RBP7.74□□□□□ -1.17
LINC01108-202ENST00000635227 EPSTI1Q96J88 318 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 NELL2Q99435 816 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 DBNDD1Q9H9R9 158 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 A1CFQ9NQ94 594 aaKnown RBP7.74□□□□□ -1.17
LINC01108-202ENST00000635227 FOXJ2Q9P0K8 574 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 NYAP2Q9P242 653 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 LRIT1Q9P2V4 623 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 NDRG4Q9ULP0 352 aaKnown RBP7.74□□□□□ -1.17
LINC01108-202ENST00000635227 PYCARDQ9ULZ3 195 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 NFE2L3Q9Y4A8 694 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 KDM3AQ9Y4C1 1321 aa7.74□□□□□ -1.17
LINC01108-202ENST00000635227 WDR27A2RRH5 827 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 PYCARD-AS1I3L0S3 204 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 PSMA7O14818 248 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 ZBTB5O15062 677 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 CYTH3O43739 400 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 CCNT1O60563 726 aaKnown RBP7.73□□□□□ -1.17
LINC01108-202ENST00000635227 CELF2O95319 508 aaKnown RBP7.73□□□□□ -1.17
LINC01108-202ENST00000635227 GOLGA8HP0CJ92 632 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 TNNT1P13805 278 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 AKR1B1P15121 316 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 PPIFP30405 207 aaKnown RBP7.73□□□□□ -1.17
LINC01108-202ENST00000635227 TBX4P57082 545 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 MYO1EQ12965 1108 aa7.73□□□□□ -1.17
LINC01108-202ENST00000635227 EIF2B5Q13144 721 aaKnown RBP7.73□□□□□ -1.17
LINC01108-202ENST00000635227 LETM2Q2VYF4 491 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms