RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 WDR24Q96S15 920 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 PAAF1Q9BRP4 392 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 PYM1Q9BRP8 204 aaKnown RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 C6orf106Q9H6K1 298 aaPredicted RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 PRDM8Q9NQV8 689 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 NCKIPSDQ9NZQ3 722 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 SRP68Q9UHB9 627 aaKnown RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 CNTN6Q9UQ52 1028 aa2.81□□□□□ -1.96
CHD2-203ENST00000625243 UBE2J1Q9Y385 318 aaPredicted RBP2.81□□□□□ -1.96
CHD2-203ENST00000625243 A0A1B0GVY2 172 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 H0Y3Z8 333 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 PCDH17O14917 1159 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 HNRNPRO43390 633 aaKnown RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 SPRY2O43597 315 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 SH3BP5O60239 455 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 PPP6R2O75170 966 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 KRT38O76015 456 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 PLAUP00749 431 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 TFRCP02786 760 aaKnown RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 UMODP07911 640 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 TNNT1P13805 278 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 MATN1P21941 496 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 KLRK1P26718 216 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 DUSP1P28562 367 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 SERPINA4P29622 427 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 IGHMBP2P38935 993 aaKnown RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 CFHR3Q02985 330 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 POU5F1BQ06416 359 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 CUL4BQ13620 913 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 EFR3AQ14156 821 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 ANKRD1Q15327 319 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 SLC4A8Q2Y0W8 1093 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 TRIM60Q495X7 471 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 AASDHQ4L235 1098 aaPredicted RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 NUGGCQ68CJ6 796 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 ANKRD40Q6AI12 368 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 WDR93Q6P2C0 686 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 ACSM6Q6P461 480 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 MMS22LQ6ZRQ5 1243 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 TRILQ7L0X0 811 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 RRAGAQ7L523 313 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 C2CD5Q86YS7 1000 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 DDX51Q8N8A6 666 aaKnown RBP eCLIP2.8□□□□□ -1.96
CHD2-203ENST00000625243 FSIP1Q8NA03 581 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 OR52L2PQ8NGH6 319 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 SCAMP5Q8TAC9 235 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 NOC3LQ8WTT2 800 aaKnown RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 SLC22A17Q8WUG5 538 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 THAP4Q8WY91 577 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 USP13Q92995 863 aaPredicted RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 UBXN10Q96LJ8 280 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 PIGSQ96S52 555 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 GATA5Q9BWX5 397 aaPredicted RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 TM2D2Q9BX73 214 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 UBA5Q9GZZ9 404 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 CDCP1Q9H5V8 836 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 CHODLQ9H9P2 273 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 RIC8AQ9NPQ8 531 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 C9orf78Q9NZ63 289 aaPredicted RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 SLC12A4Q9UP95 1085 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 GPR52Q9Y2T5 361 aa2.8□□□□□ -1.96
CHD2-203ENST00000625243 LRRFIP2Q9Y608 721 aaKnown RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 SIRT4Q9Y6E7 314 aaPredicted RBP2.8□□□□□ -1.96
CHD2-203ENST00000625243 LOC105378220A0A1B0GUY1 285 aaPredicted RBP2.79□□□□□ -1.96
CHD2-203ENST00000625243 FAM90A18PA6NE21 464 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 FAM90A16PA6NEW6 464 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 SAC3D1A6NKF1 404 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 FAM90A9PA6NNJ1 464 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 FAM90A5PA8MXJ8 464 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 KIF28PB7ZC32 967 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 EIF3FO00303 357 aaPredicted RBP2.79□□□□□ -1.96
CHD2-203ENST00000625243 CA12O43570 354 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 USP12O75317 370 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 WDHD1O75717 1129 aaPredicted RBP2.79□□□□□ -1.96
CHD2-203ENST00000625243 SERPINB2P05120 415 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 FAM90A15PP0C7V4 464 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 FAM90A14PP0C7W9 464 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 PKMP14618 531 aaKnown RBP2.79□□□□□ -1.96
CHD2-203ENST00000625243 RXRAP19793 462 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 PAX3P23760 479 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 GRK5P34947 590 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 HTR7P34969 479 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 DDIT3P35638 169 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 JAK3P52333 1124 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 ERVFC1-1P60608 527 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 SF3A3Q12874 501 aaKnown RBP eCLIP2.79□□□□□ -1.96
CHD2-203ENST00000625243 CNGA3Q16281 694 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 AAK1Q2M2I8 961 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 BTBD16Q32M84 506 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 GLE1Q53GS7 698 aaKnown RBP2.79□□□□□ -1.96
CHD2-203ENST00000625243 FAM76BQ5HYJ3 339 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 FAM90A2PQ658T7 463 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 GRHL2Q6ISB3 625 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 MSANTD2Q6P1R3 559 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 TMEM88Q6PEY1 159 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 PIK3AP1Q6ZUJ8 805 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 TRAPPC11Q7Z392 1133 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 ANKRD44Q8N8A2 993 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 USP38Q8NB14 1042 aa2.79□□□□□ -1.96
CHD2-203ENST00000625243 ADPRHL1Q8NDY3 354 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms