RNA–Protein interactions for RNA: ENST00000625243.1

CHD2-203, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-203ENST00000625243 AEBP2Q6ZN18 517 aaPredicted RBP22.38■■□□□ 1.17
CHD2-203ENST00000625243 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
CHD2-203ENST00000625243 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
CHD2-203ENST00000625243 PHF23Q9BUL5 403 aaPredicted RBP18.87■□□□□ 0.61
CHD2-203ENST00000625243 FOXD1Q16676 465 aa17.89■□□□□ 0.45
CHD2-203ENST00000625243 POTEDQ86YR6 584 aa16.99■□□□□ 0.31
CHD2-203ENST00000625243 MSH5O43196 834 aa16.86■□□□□ 0.29
CHD2-203ENST00000625243 PIAS4Q8N2W9 510 aaPredicted RBP16.65■□□□□ 0.26
CHD2-203ENST00000625243 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
CHD2-203ENST00000625243 PPP6R1Q9UPN7 881 aa16.5■□□□□ 0.23
CHD2-203ENST00000625243 ADRA2BP18089 450 aa16.44■□□□□ 0.22
CHD2-203ENST00000625243 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
CHD2-203ENST00000625243 DMRT2Q9Y5R5 561 aa15.13■□□□□ 0.01
CHD2-203ENST00000625243 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
CHD2-203ENST00000625243 CACNB1Q02641 598 aaPredicted RBP14.7□□□□□ -0.06
CHD2-203ENST00000625243 DCAF8L1A6NGE4 600 aa14.59□□□□□ -0.07
CHD2-203ENST00000625243 PPP4R3CPQ6ZMV5 832 aa14.52□□□□□ -0.09
CHD2-203ENST00000625243 HOXD11P31277 338 aaPredicted RBP14.44□□□□□ -0.1
CHD2-203ENST00000625243 RNF39Q9H2S5 420 aa14.35□□□□□ -0.11
CHD2-203ENST00000625243 CNKSR2Q8WXI2 1034 aa14.32□□□□□ -0.12
CHD2-203ENST00000625243 RNF216Q9NWF9 866 aaPredicted RBP14.26□□□□□ -0.13
CHD2-203ENST00000625243 C1QBPQ07021 282 aaKnown RBP14.13□□□□□ -0.15
CHD2-203ENST00000625243 DNAJC5BQ9UF47 199 aa13.98□□□□□ -0.17
CHD2-203ENST00000625243 NCBP3Q53F19 620 aaKnown RBP13.89□□□□□ -0.19
CHD2-203ENST00000625243 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.81□□□□□ -0.26e-10■□□□□ 10.3
CHD2-203ENST00000625243 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
CHD2-203ENST00000625243 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
CHD2-203ENST00000625243 CAPN15O75808 1086 aa13.38□□□□□ -0.27
CHD2-203ENST00000625243 SPINK5Q9NQ38 1064 aaPredicted RBP13.36□□□□□ -0.27
CHD2-203ENST00000625243 DSG3P32926 999 aa13.34□□□□□ -0.27
CHD2-203ENST00000625243 POTEHQ6S545 545 aa13.27□□□□□ -0.29
CHD2-203ENST00000625243 KCNA4P22459 653 aa13.13□□□□□ -0.31
CHD2-203ENST00000625243 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
CHD2-203ENST00000625243 TRHP20396 242 aaPredicted RBP13.09□□□□□ -0.31
CHD2-203ENST00000625243 APLP2Q06481 763 aa13.05□□□□□ -0.32
CHD2-203ENST00000625243 ABCB7O75027 752 aa13.04□□□□□ -0.32
CHD2-203ENST00000625243 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
CHD2-203ENST00000625243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.97□□□□□ -0.33
CHD2-203ENST00000625243 HNRNPUL2Q1KMD3 747 aaKnown RBP12.97□□□□□ -0.33
CHD2-203ENST00000625243 SAMD1Q6SPF0 538 aaPredicted RBP12.88□□□□□ -0.35
CHD2-203ENST00000625243 RBM42Q9BTD8 480 aaKnown RBP12.74□□□□□ -0.37
CHD2-203ENST00000625243 POLA2Q14181 598 aa12.66□□□□□ -0.38
CHD2-203ENST00000625243 MYCNP04198 464 aaPredicted RBP12.64□□□□□ -0.39
CHD2-203ENST00000625243 CHRDL2Q6WN34 429 aa12.6□□□□□ -0.39
CHD2-203ENST00000625243 AKT1S1Q96B36 256 aa12.38□□□□□ -0.43
CHD2-203ENST00000625243 ATF5Q9Y2D1 282 aaPredicted RBP12.38□□□□□ -0.43
CHD2-203ENST00000625243 ZBTB12Q9Y330 459 aaPredicted RBP12.36□□□□□ -0.43
CHD2-203ENST00000625243 SLC4A1APQ9BWU0 796 aaKnown RBP12.34□□□□□ -0.43
CHD2-203ENST00000625243 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
CHD2-203ENST00000625243 REM2Q8IYK8 340 aaPredicted RBP12.28□□□□□ -0.44
CHD2-203ENST00000625243 SP7Q8TDD2 431 aaPredicted RBP12.28□□□□□ -0.44
CHD2-203ENST00000625243 OSCARQ8IYS5 282 aa12.25□□□□□ -0.45
CHD2-203ENST00000625243 PIP4P2Q8N4L2 257 aa12.23□□□□□ -0.45
CHD2-203ENST00000625243 PITPNM1O00562 1244 aa12.14□□□□□ -0.47
CHD2-203ENST00000625243 HAX1O00165 279 aa12.13□□□□□ -0.47
CHD2-203ENST00000625243 FXR2P51116 673 aaKnown RBP eCLIP12.09□□□□□ -0.472e-7■□□□□ 9.9
CHD2-203ENST00000625243 ZBTB22O15209 634 aa12.05□□□□□ -0.48
CHD2-203ENST00000625243 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
CHD2-203ENST00000625243 SPDYE2BA6NHP3 402 aa11.95□□□□□ -0.5
CHD2-203ENST00000625243 SPDYE6P0CI01 402 aa11.95□□□□□ -0.5
CHD2-203ENST00000625243 SPDYE2Q495Y8 402 aa11.95□□□□□ -0.5
CHD2-203ENST00000625243 FBLN2P98095 1184 aa11.94□□□□□ -0.5
CHD2-203ENST00000625243 EVX2Q03828 476 aa11.92□□□□□ -0.5
CHD2-203ENST00000625243 CLEC11AQ9Y240 323 aa11.85□□□□□ -0.51
CHD2-203ENST00000625243 PRKAR2AP13861 404 aaKnown RBP11.84□□□□□ -0.51
CHD2-203ENST00000625243 SPDYE1Q8NFV5 336 aaPredicted RBP11.83□□□□□ -0.52
CHD2-203ENST00000625243 MKRN4PQ13434 485 aaPredicted RBP11.79□□□□□ -0.52
CHD2-203ENST00000625243 ZNF692Q9BU19 519 aaPredicted RBP11.78□□□□□ -0.52
CHD2-203ENST00000625243 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
CHD2-203ENST00000625243 C19orf67A6NJJ6 358 aa11.72□□□□□ -0.53
CHD2-203ENST00000625243 GABBR2O75899 941 aa11.64□□□□□ -0.55
CHD2-203ENST00000625243 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
CHD2-203ENST00000625243 PRR29P0C7W0 189 aa11.6□□□□□ -0.55
CHD2-203ENST00000625243 PABPN1Q86U42 306 aaKnown RBP eCLIP11.59□□□□□ -0.55
CHD2-203ENST00000625243 LHX8Q68G74 356 aa11.53□□□□□ -0.56
CHD2-203ENST00000625243 CD44P16070 742 aaKnown RBP11.44□□□□□ -0.58
CHD2-203ENST00000625243 FARP1Q9Y4F1 1045 aaPredicted RBP11.43□□□□□ -0.58
CHD2-203ENST00000625243 POTEIP0CG38 1075 aa11.37□□□□□ -0.59
CHD2-203ENST00000625243 CLCN6P51797 869 aa11.32□□□□□ -0.6
CHD2-203ENST00000625243 DCBLD2Q96PD2 775 aa11.28□□□□□ -0.6
CHD2-203ENST00000625243 ZRANB1Q9UGI0 708 aa11.24□□□□□ -0.61
CHD2-203ENST00000625243 ZNF579Q8NAF0 562 aaKnown RBP11.23□□□□□ -0.61
CHD2-203ENST00000625243 CREBZFQ9NS37 354 aa11.22□□□□□ -0.61
CHD2-203ENST00000625243 CSRNP3Q8WYN3 585 aa11.21□□□□□ -0.61
CHD2-203ENST00000625243 STAG3Q9UJ98 1225 aa11.2□□□□□ -0.62
CHD2-203ENST00000625243 GALR2O43603 387 aaPredicted RBP11.13□□□□□ -0.63
CHD2-203ENST00000625243 SPDYE4A6NLX3 237 aa11.09□□□□□ -0.63
CHD2-203ENST00000625243 PAK3O75914 559 aaPredicted RBP11.08□□□□□ -0.64
CHD2-203ENST00000625243 PLSCR2Q9NRY7 297 aa11.08□□□□□ -0.64
CHD2-203ENST00000625243 PHF12Q96QT6 1004 aa11.06□□□□□ -0.64
CHD2-203ENST00000625243 OTUD5Q96G74 571 aa11.03□□□□□ -0.64
CHD2-203ENST00000625243 NPM1P06748 294 aaKnown RBP eCLIP11.01□□□□□ -0.65
CHD2-203ENST00000625243 POTEB2H3BUK9 544 aa11□□□□□ -0.65
CHD2-203ENST00000625243 MNX1P50219 401 aaPredicted RBP10.96□□□□□ -0.65
CHD2-203ENST00000625243 PELP1Q8IZL8 1130 aaKnown RBP10.95□□□□□ -0.66
CHD2-203ENST00000625243 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
CHD2-203ENST00000625243 MS4A3Q96HJ5 214 aa10.88□□□□□ -0.67
CHD2-203ENST00000625243 POTEMA6NI47 508 aa10.87□□□□□ -0.67
CHD2-203ENST00000625243 METRNQ9UJH8 293 aa10.87□□□□□ -0.67
CHD2-203ENST00000625243 ASTLQ6HA08 431 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms