RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 TRPM4Q8TD43 1214 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 C12orf42Q96LP6 360 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 HAPLN3Q96S86 360 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 PKP2Q99959 881 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 SUDS3Q9H7L9 328 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-211ENST00000622020 GOLGA2P5Q9HBQ8 144 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 ZDHHC2Q9UIJ5 367 aa16.1■□□□□ 0.17
NPHP4-211ENST00000622020 DPYSL4O14531 572 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 TRIM13O60858 407 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 MT-CO1P00395 513 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 GRIA4P48058 902 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 NR2C2P49116 596 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 KIZQ2M2Z5 673 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 STEAP4Q687X5 459 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 RPS27LQ71UM5 84 aaKnown RBP16.09■□□□□ 0.17
NPHP4-211ENST00000622020 KYQ8NBH2 561 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 FAM81AQ8TBF8 368 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 ASB7Q9H672 318 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 ADA2Q9NZK5 511 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 PSMD13Q9UNM6 376 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 RLFQ13129 1914 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 VILLO15195 856 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 TGFB3P10600 412 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 ZFXP17010 805 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-211ENST00000622020 HDCP19113 662 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 ACAT1P24752 427 aaKnown RBP16.09■□□□□ 0.17
NPHP4-211ENST00000622020 ART3Q13508 389 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 KLHDC10Q6PID8 442 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 AMIGO2Q86SJ2 522 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 USP33Q8TEY7 942 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 RBBP8Q99708 897 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 SIKE1Q9BRV8 207 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 ILKAPQ9H0C8 392 aaPredicted RBP16.09■□□□□ 0.17
NPHP4-211ENST00000622020 RHBDL2Q9NX52 303 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 VANGL2Q9ULK5 521 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 SH3BP1Q9Y3L3 701 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 SNX10Q9Y5X0 201 aa16.09■□□□□ 0.17
NPHP4-211ENST00000622020 NUP205Q92621 2012 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 M0QYT0 321 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 C22orf31O95567 290 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 MCF2P10911 925 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 SPRP35270 261 aaPredicted RBP16.08■□□□□ 0.17
NPHP4-211ENST00000622020 ZNF280AP59817 542 aaPredicted RBP16.08■□□□□ 0.17
NPHP4-211ENST00000622020 ADIGQ0VDE8 80 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 CYLC2Q14093 348 aaPredicted RBP16.08■□□□□ 0.17
NPHP4-211ENST00000622020 MAP7Q14244 749 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 PKDCCQ504Y2 493 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 SYPL2Q5VXT5 272 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 BNC2Q6ZN30 1099 aaPredicted RBP16.08■□□□□ 0.17
NPHP4-211ENST00000622020 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.08■□□□□ 0.17
NPHP4-211ENST00000622020 ZFP28Q8NHY6 868 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 GRIN3AQ8TCU5 1115 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 RNF139Q8WU17 664 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 APBA2Q99767 749 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 RTKNQ9BST9 563 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 FAM49AQ9H0Q0 323 aaPredicted RBP16.08■□□□□ 0.17
NPHP4-211ENST00000622020 PCDHAC1Q9H158 963 aa16.08■□□□□ 0.17
NPHP4-211ENST00000622020 LIN28AQ9H9Z2 209 aaKnown RBP16.08■□□□□ 0.17
NPHP4-211ENST00000622020 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.08■□□□□ 0.17
NPHP4-211ENST00000622020 GRM2Q14416 872 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 OGFRL1Q5TC84 451 aaPredicted RBP16.08■□□□□ 0.16
NPHP4-211ENST00000622020 LAYNQ6UX15 382 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 CEP70Q8NHQ1 597 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 SMARCAD1Q9H4L7 1026 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 STN1Q9H668 368 aaKnown RBP16.08■□□□□ 0.16
NPHP4-211ENST00000622020 TXNRD2Q9NNW7 524 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 STK39Q9UEW8 545 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 SOCS7O14512 581 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 HBP1O60381 514 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 TFEBP19484 476 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 EDNRBP24530 442 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 PCSK6P29122 969 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 SCNN1BP51168 640 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 MYBPC1Q00872 1141 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 TNFAIP2Q03169 654 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 MYLK3Q32MK0 819 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 RARS2Q5T160 578 aaKnown RBP16.08■□□□□ 0.16
NPHP4-211ENST00000622020 KCTD4Q8WVF5 259 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 NCSTNQ92542 709 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 KLHL32Q96NJ5 620 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 CPNE1Q99829 537 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 FERMT1Q9BQL6 677 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 MRPL1Q9BYD6 325 aaKnown RBP16.08■□□□□ 0.16
NPHP4-211ENST00000622020 ACE2Q9BYF1 805 aaPredicted RBP16.08■□□□□ 0.16
NPHP4-211ENST00000622020 ZNF112Q9UJU3 913 aa16.08■□□□□ 0.16
NPHP4-211ENST00000622020 H3BSA7 217 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 ZBTB24O43167 697 aaPredicted RBP16.07■□□□□ 0.16
NPHP4-211ENST00000622020 ATP5BP06576 529 aaKnown RBP16.07■□□□□ 0.16
NPHP4-211ENST00000622020 THRAP10827 490 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 RPL10P27635 214 aaKnown RBP16.07■□□□□ 0.16
NPHP4-211ENST00000622020 SERPINB8P50452 374 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 GRM3Q14832 879 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 SEL1L3Q68CR1 1132 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 DGCR14Q96DF8 476 aaKnown RBP16.07■□□□□ 0.16
NPHP4-211ENST00000622020 PRICKLE1Q96MT3 831 aaPredicted RBP16.07■□□□□ 0.16
NPHP4-211ENST00000622020 EIF2AQ9BY44 585 aaKnown RBP16.07■□□□□ 0.16
NPHP4-211ENST00000622020 WDR41Q9HAD4 459 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 GJD2Q9UKL4 321 aa16.07■□□□□ 0.16
NPHP4-211ENST00000622020 RUVBL2Q9Y230 463 aaKnown RBP16.07■□□□□ 0.16
NPHP4-211ENST00000622020 TBC1D30Q9Y2I9 924 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms